Lineage for Protein: Importin beta

  1. Root: SCOPe 2.08
  2. 2685877Class a: All alpha proteins [46456] (290 folds)
  3. 2725421Fold a.118: alpha-alpha superhelix [48370] (28 superfamilies)
    multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix
  4. 2725422Superfamily a.118.1: ARM repeat [48371] (28 families) (S)
  5. 2725423Family a.118.1.1: Armadillo repeat [48372] (7 proteins)
    this is a repeat family; one repeat unit is 1ee4 A:288-330 found in domain
  6. 2725501Protein Importin beta [48378] (3 species)

Species:

  1. 2725502Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [140814] (1 PDB entry)
    Uniprot Q06142 1-861
    • Domain for 2bku:
      • 2725503Domain d2bkub1: 2bku B:1-861 [128712]
        Other proteins in same PDB: d2bkua_, d2bkuc_, d2bkud_
        complexed with gtp, mg
        applies to all domains of a family if the common domain is composed of a different number of small repeating units
  2. 2725504Human (Homo sapiens) [TaxId:9606] [48379] (11 PDB entries)
    1. Domains for 1f59:
      1. 2725516Domain d1f59a_: 1f59 A: [19123]
        Other proteins in same PDB: d1f59c_, d1f59d_
        applies to all domains of a family if the common domain is composed of a different number of small repeating units
      2. 2725517Domain d1f59b_: 1f59 B: [19124]
        Other proteins in same PDB: d1f59c_, d1f59d_
        applies to all domains of a family if the common domain is composed of a different number of small repeating units
    2. Domains for 1ibr:
      1. 2725507Domain d1ibrb_: 1ibr B: [19120]
        Other proteins in same PDB: d1ibra_, d1ibrc_
        complexed with gnp, mg
        applies to all domains of a family if the common domain is composed of a different number of small repeating units
      2. 2725508Domain d1ibrd_: 1ibr D: [19121]
        Other proteins in same PDB: d1ibra_, d1ibrc_
        complexed with gnp, mg
        applies to all domains of a family if the common domain is composed of a different number of small repeating units
    3. Domain for 1m5n:
      • 2725520Domain d1m5ns_: 1m5n S: [78653]
        bound to the non-classical nls(67-94) of pthrp, chain Q
        applies to all domains of a family if the common domain is composed of a different number of small repeating units
    4. Domains for 1o6o:
      1. 2725510Domain d1o6oa_: 1o6o A: [92574]
        bound to five fxfg repeats from yeast nsp1p, chains D, E and F
        applies to all domains of a family if the common domain is composed of a different number of small repeating units
      2. 2725511Domain d1o6ob_: 1o6o B: [92575]
        bound to five fxfg repeats from yeast nsp1p, chains D, E and F
        applies to all domains of a family if the common domain is composed of a different number of small repeating units
      3. 2725512Domain d1o6oc_: 1o6o C: [92576]
        bound to five fxfg repeats from yeast nsp1p, chains D, E and F
        applies to all domains of a family if the common domain is composed of a different number of small repeating units
    5. Domains for 1o6p:
      1. 2725514Domain d1o6pa_: 1o6p A: [86636]
        bound to a glfg nucleoporin peptide, chains C, D, E and F
        applies to all domains of a family if the common domain is composed of a different number of small repeating units
      2. 2725515Domain d1o6pb_: 1o6p B: [86637]
        bound to a glfg nucleoporin peptide, chains C, D, E and F
        applies to all domains of a family if the common domain is composed of a different number of small repeating units
    6. Domain for 1qgk:
      • 2725509Domain d1qgka_: 1qgk A: [19122]
        applies to all domains of a family if the common domain is composed of a different number of small repeating units
    7. Domain for 1qgr:
      • 2725505Domain d1qgra_: 1qgr A: [19119]
        applies to all domains of a family if the common domain is composed of a different number of small repeating units
    8. Domain for 2p8q:
      • 2725506Domain d2p8qa_: 2p8q A: [149314]
        Other proteins in same PDB: d2p8qb_
        automated match to d1qgka_
        applies to all domains of a family if the common domain is composed of a different number of small repeating units
    9. Domains for 2q5d:
      1. 2725521Domain d2q5da_: 2q5d A: [238820]
        Other proteins in same PDB: d2q5dc_, d2q5dd_
        automatically matched to d1m5ns_
        applies to all domains of a family if the common domain is composed of a different number of small repeating units
      2. 2725522Domain d2q5db_: 2q5d B: [238821]
        Other proteins in same PDB: d2q5dc_, d2q5dd_
        automatically matched to d1m5ns_
        applies to all domains of a family if the common domain is composed of a different number of small repeating units
    10. Domains for 3lww:
      1. 2725518Domain d3lwwa_: 3lww A: [247527]
        automated match to d1qgra_
        applies to all domains of a family if the common domain is composed of a different number of small repeating units
      2. 2725519Domain d3lwwc_: 3lww C: [247528]
        automated match to d1qgra_
        applies to all domains of a family if the common domain is composed of a different number of small repeating units
    11. Domain for 3w5k:
      • 2725513Domain d3w5ka_: 3w5k A: [237471]
        automated match to d2p8qa_
        complexed with zn

        applies to all domains of a family if the common domain is composed of a different number of small repeating units
  3. 2725523Mouse (Mus musculus) [TaxId:10090] [48380] (2 PDB entries)
    1. Domains for 1gcj:
      1. 2725524Domain d1gcja1: 1gcj A:1-449 [19125]
        Other proteins in same PDB: d1gcja2, d1gcja3, d1gcjb2, d1gcjb3
        applies to all domains of a family if the common domain is composed of a different number of small repeating units
      2. 2725525Domain d1gcjb1: 1gcj B:1-449 [19126]
        Other proteins in same PDB: d1gcja2, d1gcja3, d1gcjb2, d1gcjb3
        applies to all domains of a family if the common domain is composed of a different number of small repeating units
    2. Domains for 1ukl:
      1. 2725526Domain d1ukla_: 1ukl A: [99493]
        Other proteins in same PDB: d1uklc_, d1ukld_, d1ukle_, d1uklf_
        complexed with SREBP-2 HLH domain
        protein/DNA complex

        applies to all domains of a family if the common domain is composed of a different number of small repeating units
      2. 2725527Domain d1uklb_: 1ukl B: [99494]
        Other proteins in same PDB: d1uklc_, d1ukld_, d1ukle_, d1uklf_
        complexed with SREBP-2 HLH domain
        protein/DNA complex

        applies to all domains of a family if the common domain is composed of a different number of small repeating units

More info for Protein Importin beta from a.118.1.1: Armadillo repeat

Timeline for Protein Importin beta from a.118.1.1: Armadillo repeat: