SCOPe 2.08: Domain d1rz4a1: 1rz4 A:132-216

Lineage for d1rz4a1 (1rz4 A:132-216)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
   core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down

4. Superfamily a.4.5: 'Winged helix' DNA-binding domain [46785] (86 families)
   contains a small beta-sheet (wing)

5. Family a.4.5.47: C-terminal part of PCI (proteasome COP9/signalosome eIF3) domains (PINT motif) [109671] (11 proteins)
   Pfam PF01399
   some members have long C-terminal tail with helix

6. Protein Eukaryotic translation initiation factor 3 subunit 12, eIF3k, C-terminal domain [346009] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [346152] (1 PDB entry)
   Uniprot Q9UBQ5

8. Domain d1rz4a1: 1rz4 A:132-216 [105131]
   Other proteins in same PDB: d1rz4a2
   complexed with so4

Details for d1rz4a1

PDB Entry: 1rz4, 2.1 Å

PDB Description: Crystal Structure of Human eIF3k

PDB Compounds: (A:) Eukaryotic translation initiation factor 3 subunit 11

SCOPe Domain Sequences for d1rz4a1:

Sequence, based on SEQRES records:

>d1rz4a1 a.4.5.47 (A:132-216) Eukaryotic translation initiation factor 3 subunit 12, eIF3k, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
tgfedsvrkfichvvgityqhidrwllaemlgdlsdsqlkvwmskygwsadesgqifics
qeesikpknivekidfdsvssimas

Sequence, based on observed residues (ATOM records):

>d1rz4a1 a.4.5.47 (A:132-216) Eukaryotic translation initiation factor 3 subunit 12, eIF3k, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
tgfedsvrkfichvvgityqhidrwllaemlgdlsdsqlkvwmskygwsadeqificsqe
esikpknivekidfdsvssimas

Timeline for d1rz4a1:

• d1rz4a1 first appeared in SCOP 1.69
  
• d1rz4a1 appears in SCOPe 2.07