SCOPe 2.08: Family a.4.5.47: C-terminal part of PCI (proteasome COP9/signalosome eIF3) domains (PINT motif)

Lineage for Family a.4.5.47: C-terminal part of PCI (proteasome COP9/signalosome eIF3) domains (PINT motif)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
   core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down

4. Superfamily a.4.5: 'Winged helix' DNA-binding domain [46785] (86 families)
   contains a small beta-sheet (wing)

5. Family a.4.5.47: C-terminal part of PCI (proteasome COP9/signalosome eIF3) domains (PINT motif) [109671] (11 proteins)
   Pfam PF01399
   some members have long C-terminal tail with helix

Proteins:

1. COP9 signalosome complex subunit 1 (CSN1), C-terminal domain [346012] (1 species)

   • Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [346156] (1 PDB entry)

2. COP9 signalosome complex subunit 4 (CSN4), C-terminal domain [109672] (1 species)

   • Species Mouse (Mus musculus) [TaxId:10090] [109673] (1 PDB entry)
     Uniprot O88544 296-366

3. COP9 signalosome complex subunit 7 (CSN7), C-terminal domain [346013] (1 species)

   • Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [346157] (1 PDB entry)

4. Eukaryotic translation initiation factor 3 subunit 12, eIF3k, C-terminal domain [346009] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [346152] (1 PDB entry)
     Uniprot Q9UBQ5

5. Hypothetical protein C20orf116 homolog [116793] (1 species)

   • Species Mouse (Mus musculus) [TaxId:10090] [116794] (1 PDB entry)
     Uniprot Q80WW9 216-274

6. Proteasome regulatory subunit Rpn12, C-terminal domain [346014] (1 species)

   • Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [346158] (1 PDB entry)

7. Proteasome regulatory subunit Rpn3, C-terminal domain [346015] (1 species)

   • Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [346159] (1 PDB entry)

8. Proteasome regulatory subunit Rpn5, C-terminal domain [346016] (1 species)

   • Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [346160] (1 PDB entry)

9. Proteasome regulatory subunit Rpn6, C-terminal domain [346017] (2 species)

   1. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [346161] (1 PDB entry)

   2. Species Fruit fly (Drosophila melanogaster) [TaxId:7227] [346162] (2 PDB entries)

10. Proteasome regulatory subunit Rpn7, C-terminal domain [346018] (1 species)

    • Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [346163] (1 PDB entry)

11. Proteasome regulatory subunit Rpn9, C-terminal domain [346019] (1 species)

    • Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [346164] (1 PDB entry)

More info for Family a.4.5.47: C-terminal part of PCI (proteasome COP9/signalosome eIF3) domains (PINT motif)

Timeline for Family a.4.5.47: C-terminal part of PCI (proteasome COP9/signalosome eIF3) domains (PINT motif):

• Family a.4.5.47: C-terminal part of PCI (proteasome COP9/signalosome eIF3) domains (PINT motif) first appeared in SCOP 1.69, called Family a.4.5.47: PCI domain (PINT motif, Pfam 01399)
  
• Family a.4.5.47: C-terminal part of PCI (proteasome COP9/signalosome eIF3) domains (PINT motif) appears in SCOPe 2.07