SCOPe 2.07: Protein: Noncollagenous (NC1) domain of collagen IV

Lineage for Protein: Noncollagenous (NC1) domain of collagen IV

Root: SCOPe 2.07
Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
Fold d.169: C-type lectin-like [56435] (1 superfamily)
unusual fold
Superfamily d.169.1: C-type lectin-like [56436] (9 families)

Family d.169.1.6: Noncollagenous (NC1) domain of collagen IV [75585] (2 proteins)
duplication: consists of two subdomains of this fold; segment swapping within and between individual domains
automatically mapped to Pfam PF01413

Protein Noncollagenous (NC1) domain of collagen IV [75586] (2 species)

Species:

Cow (Bos taurus) [TaxId:9913] [82820] (3 PDB entries)
Uniprot P02462 1445-1667
1. Domains for 1m3d:
  1. Domain d1m3da1: 1m3d A:5-114 [78533]
    alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
    complexed with br, gol, lu
  2. Domain d1m3da2: 1m3d A:115-227 [78534]
    alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
    complexed with br, gol, lu
  3. Domain d1m3db1: 1m3d B:6-114 [78535]
    alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
    complexed with br, gol, lu
  4. Domain d1m3db2: 1m3d B:115-229 [78536]
    alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
    complexed with br, gol, lu
  5. Domain d1m3dc1: 1m3d C:5-114 [78537]
    alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
    complexed with br, gol, lu
  6. Domain d1m3dc2: 1m3d C:115-226 [78538]
    alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
    complexed with br, gol, lu
  7. Domain d1m3dd1: 1m3d D:4-114 [78539]
    alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
    complexed with br, gol, lu
  8. Domain d1m3dd2: 1m3d D:115-228 [78540]
    alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
    complexed with br, gol, lu
  9. Domain d1m3de1: 1m3d E:4-114 [78541]
    alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
    complexed with br, gol, lu
  10. Domain d1m3de2: 1m3d E:115-227 [78542]
    alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
    complexed with br, gol, lu
  11. Domain d1m3df1: 1m3d F:4-114 [78543]
    alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
    complexed with br, gol, lu
  12. Domain d1m3df2: 1m3d F:115-226 [78544]
    alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
    complexed with br, gol, lu
  13. Domain d1m3dg1: 1m3d G:4-114 [78545]
    alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
    complexed with br, gol, lu
  14. Domain d1m3dg2: 1m3d G:115-228 [78546]
    alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
    complexed with br, gol, lu
  15. Domain d1m3dh1: 1m3d H:4-114 [78547]
    alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
    complexed with br, gol, lu
  16. Domain d1m3dh2: 1m3d H:115-227 [78548]
    alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
    complexed with br, gol, lu
  17. Domain d1m3di1: 1m3d I:5-114 [78549]
    alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
    complexed with br, gol, lu
  18. Domain d1m3di2: 1m3d I:115-226 [78550]
    alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
    complexed with br, gol, lu
  19. Domain d1m3dj1: 1m3d J:5-114 [78551]
    alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
    complexed with br, gol, lu
  20. Domain d1m3dj2: 1m3d J:115-227 [78552]
    alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
    complexed with br, gol, lu
  21. Domain d1m3dk1: 1m3d K:6-114 [78553]
    alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
    complexed with br, gol, lu
  22. Domain d1m3dk2: 1m3d K:115-229 [78554]
    alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
    complexed with br, gol, lu
  23. Domain d1m3dl1: 1m3d L:5-114 [78555]
    alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
    complexed with br, gol, lu
  24. Domain d1m3dl2: 1m3d L:115-226 [78556]
    alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
    complexed with br, gol, lu
2. Domains for 1t60:
  1. Domain d1t60a1: 1t60 A:6-114 [106497]
    complexed with cl, k, mpd
  2. Domain d1t60a2: 1t60 A:115-225 [106498]
    complexed with cl, k, mpd
  3. Domain d1t60b1: 1t60 B:6-114 [106499]
    complexed with cl, k, mpd
  4. Domain d1t60b2: 1t60 B:115-225 [106500]
    complexed with cl, k, mpd
  5. Domain d1t60c1: 1t60 C:3-114 [197523]
    automated match to d1m3df1
    complexed with cl, k, mpd
  6. Domain d1t60c2: 1t60 C:115-225 [197524]
    automated match to d1m3df2
    complexed with cl, k, mpd
  7. Domain d1t60d1: 1t60 D:6-114 [106501]
    complexed with cl, k, mpd
  8. Domain d1t60d2: 1t60 D:115-225 [106502]
    complexed with cl, k, mpd
  9. Domain d1t60e1: 1t60 E:6-114 [106503]
    complexed with cl, k, mpd
  10. Domain d1t60e2: 1t60 E:115-225 [106504]
    complexed with cl, k, mpd
  11. Domain d1t60f1: 1t60 F:5-114 [197525]
    automated match to d1m3dc1
    complexed with cl, k, mpd
  12. Domain d1t60f2: 1t60 F:115-226 [197526]
    automated match to d1m3dc2
    complexed with cl, k, mpd
  13. Domain d1t60g1: 1t60 G:6-114 [106505]
    complexed with cl, k, mpd
  14. Domain d1t60g2: 1t60 G:115-225 [106506]
    complexed with cl, k, mpd
  15. Domain d1t60h1: 1t60 H:6-114 [106507]
    complexed with cl, k, mpd
  16. Domain d1t60h2: 1t60 H:115-225 [106508]
    complexed with cl, k, mpd
  17. Domain d1t60i1: 1t60 I:2-114 [197527]
    automated match to d1m3df1
    complexed with cl, k, mpd
  18. Domain d1t60i2: 1t60 I:115-226 [197528]
    automated match to d1m3df2
    complexed with cl, k, mpd
  19. Domain d1t60j1: 1t60 J:6-114 [106509]
    complexed with cl, k, mpd
  20. Domain d1t60j2: 1t60 J:115-225 [106510]
    complexed with cl, k, mpd
  21. Domain d1t60k1: 1t60 K:6-114 [106511]
    complexed with cl, k, mpd
  22. Domain d1t60k2: 1t60 K:115-225 [106512]
    complexed with cl, k, mpd
  23. Domain d1t60l1: 1t60 L:6-114 [197529]
    automated match to d1m3dc1
    complexed with cl, k, mpd
  24. Domain d1t60l2: 1t60 L:115-226 [197530]
    automated match to d1m3dc2
    complexed with cl, k, mpd
  25. Domain d1t60m1: 1t60 M:6-114 [106513]
    complexed with cl, k, mpd
  26. Domain d1t60m2: 1t60 M:115-225 [106514]
    complexed with cl, k, mpd
  27. Domain d1t60n1: 1t60 N:6-114 [106515]
    complexed with cl, k, mpd
  28. Domain d1t60n2: 1t60 N:115-225 [106516]
    complexed with cl, k, mpd
  29. Domain d1t60o1: 1t60 O:3-114 [197531]
    automated match to d1m3df1
    complexed with cl, k, mpd
  30. Domain d1t60o2: 1t60 O:115-226 [197532]
    automated match to d1m3df2
    complexed with cl, k, mpd
  31. Domain d1t60p1: 1t60 P:6-114 [106517]
    complexed with cl, k, mpd
  32. Domain d1t60p2: 1t60 P:115-225 [106518]
    complexed with cl, k, mpd
  33. Domain d1t60q1: 1t60 Q:6-114 [106519]
    complexed with cl, k, mpd
  34. Domain d1t60q2: 1t60 Q:115-225 [106520]
    complexed with cl, k, mpd
  35. Domain d1t60r1: 1t60 R:3-114 [197533]
    automated match to d1m3df1
    complexed with cl, k, mpd
  36. Domain d1t60r2: 1t60 R:115-226 [197534]
    automated match to d1m3df2
    complexed with cl, k, mpd
  37. Domain d1t60s1: 1t60 S:6-114 [106521]
    complexed with cl, k, mpd
  38. Domain d1t60s2: 1t60 S:115-225 [106522]
    complexed with cl, k, mpd
  39. Domain d1t60t1: 1t60 T:6-114 [106523]
    complexed with cl, k, mpd
  40. Domain d1t60t2: 1t60 T:115-225 [106524]
    complexed with cl, k, mpd
  41. Domain d1t60u1: 1t60 U:3-114 [197535]
    automated match to d1m3df1
    complexed with cl, k, mpd
  42. Domain d1t60u2: 1t60 U:115-226 [197536]
    automated match to d1m3df2
    complexed with cl, k, mpd
  43. Domain d1t60v1: 1t60 V:6-114 [106525]
    complexed with cl, k, mpd
  44. Domain d1t60v2: 1t60 V:115-225 [106526]
    complexed with cl, k, mpd
  45. Domain d1t60w1: 1t60 W:6-114 [106527]
    complexed with cl, k, mpd
  46. Domain d1t60w2: 1t60 W:115-225 [106528]
    complexed with cl, k, mpd
  47. Domain d1t60x1: 1t60 X:4-114 [197537]
    automated match to d1m3df1
    complexed with cl, k, mpd
  48. Domain d1t60x2: 1t60 X:115-226 [197538]
    automated match to d1m3df2
    complexed with cl, k, mpd
3. Domains for 1t61:
  1. Domain d1t61a1: 1t61 A:6-114 [106529]
    complexed with ca, cl, gol, k
  2. Domain d1t61a2: 1t61 A:115-225 [106530]
    complexed with ca, cl, gol, k
  3. Domain d1t61b1: 1t61 B:6-114 [106531]
    complexed with ca, cl, gol, k
  4. Domain d1t61b2: 1t61 B:115-225 [106532]
    complexed with ca, cl, gol, k
  5. Domain d1t61c1: 1t61 C:6-114 [106533]
    complexed with ca, cl, gol, k
  6. Domain d1t61c2: 1t61 C:115-225 [106534]
    complexed with ca, cl, gol, k
  7. Domain d1t61d1: 1t61 D:6-114 [106535]
    complexed with ca, cl, gol, k
  8. Domain d1t61d2: 1t61 D:115-225 [106536]
    complexed with ca, cl, gol, k
  9. Domain d1t61e1: 1t61 E:6-114 [106537]
    complexed with ca, cl, gol, k
  10. Domain d1t61e2: 1t61 E:115-225 [106538]
    complexed with ca, cl, gol, k
  11. Domain d1t61f1: 1t61 F:6-114 [106539]
    complexed with ca, cl, gol, k
  12. Domain d1t61f2: 1t61 F:115-225 [106540]
    complexed with ca, cl, gol, k
Human (Homo sapiens) [TaxId:9606] [75587] (5 PDB entries)
1. Domains for 1li1:
  1. Domain d1li1a1: 1li1 A:2-114 [73898]
    alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
    complexed with act
  2. Domain d1li1a2: 1li1 A:115-229 [73899]
    alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
    complexed with act
  3. Domain d1li1b1: 1li1 B:3-114 [73900]
    alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
    complexed with act
  4. Domain d1li1b2: 1li1 B:115-229 [73901]
    alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
    complexed with act
  5. Domain d1li1c1: 1li1 C:5-114 [73902]
    alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
    complexed with act
  6. Domain d1li1c2: 1li1 C:115-229 [73903]
    alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
    complexed with act
  7. Domain d1li1d1: 1li1 D:2-114 [73904]
    alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
    complexed with act
  8. Domain d1li1d2: 1li1 D:115-229 [73905]
    alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
    complexed with act
  9. Domain d1li1e1: 1li1 E:3-114 [73906]
    alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
    complexed with act
  10. Domain d1li1e2: 1li1 E:115-229 [73907]
    alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
    complexed with act
  11. Domain d1li1f1: 1li1 F:4-114 [73908]
    alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
    complexed with act
  12. Domain d1li1f2: 1li1 F:115-229 [73909]
    alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
    complexed with act
2. Domains for 5nax:
  1. Domain d5naxa1: 5nax A:3-114 [357497]
    automated match to d1li1a1
    complexed with cl
  2. Domain d5naxa2: 5nax A:115-228 [357498]
    automated match to d1li1a2
    complexed with cl
  3. Domain d5naxb1: 5nax B:3-114 [357483]
    automated match to d1li1a1
    complexed with cl
  4. Domain d5naxb2: 5nax B:115-229 [357484]
    automated match to d1li1a2
    complexed with cl
  5. Domain d5naxc1: 5nax C:5-112 [357488]
    automated match to d1li1c1
    complexed with cl
  6. Domain d5naxc2: 5nax C:113-228 [357489]
    automated match to d1li1c2
    complexed with cl
  7. Domain d5naxd1: 5nax D:4-114 [357555]
    automated match to d1li1a1
    complexed with cl
  8. Domain d5naxd2: 5nax D:115-228 [357556]
    automated match to d1li1a2
    complexed with cl
  9. Domain d5naxe1: 5nax E:4-112 [357539]
    automated match to d1li1f1
    complexed with cl
  10. Domain d5naxe2: 5nax E:113-226 [357540]
    automated match to d1li1f2
    complexed with cl
  11. Domain d5naxf1: 5nax F:5-114 [357547]
    automated match to d1li1a1
    complexed with cl
  12. Domain d5naxf2: 5nax F:115-227 [357548]
    automated match to d1li1a2
    complexed with cl
3. Domains for 5nay:
  1. Domain d5naya1: 5nay A:2-114 [357613]
    automated match to d1li1a1
    complexed with cl, so4
  2. Domain d5naya2: 5nay A:115-229 [357614]
    automated match to d1li1a2
    complexed with cl, so4
  3. Domain d5nayb1: 5nay B:2-114 [357610]
    automated match to d1li1a1
    complexed with cl, so4
  4. Domain d5nayb2: 5nay B:115-229 [357611]
    automated match to d1li1a2
    complexed with cl, so4
  5. Domain d5nayc1: 5nay C:2-114 [357595]
    automated match to d1li1a1
    complexed with cl, so4
  6. Domain d5nayc2: 5nay C:115-229 [357596]
    automated match to d1li1a2
    complexed with cl, so4
  7. Domain d5nayd1: 5nay D:2-114 [357624]
    automated match to d1li1a1
    complexed with cl, so4
  8. Domain d5nayd2: 5nay D:115-229 [357625]
    automated match to d1li1a2
    complexed with cl, so4
  9. Domain d5naye1: 5nay E:1-114 [357561]
    automated match to d1li1a1
    complexed with cl, so4
  10. Domain d5naye2: 5nay E:115-229 [357562]
    automated match to d1li1a2
    complexed with cl, so4
  11. Domain d5nayf1: 5nay F:1-114 [357492]
    automated match to d1li1a1
    complexed with cl, so4
  12. Domain d5nayf2: 5nay F:115-229 [357493]
    automated match to d1li1a2
    complexed with cl, so4
4. Domains for 5nb2:
  1. Domain d5nb2a1: 5nb2 A:3-112 [357581]
    automated match to d1li1f1
  2. Domain d5nb2b1: 5nb2 B:5-112 [357546]
    automated match to d1li1c1
5. Domains for 6mpx:
  1. Domain d6mpxa1: 6mpx A:4-114 [367243]
    automated match to d1li1a1
    complexed with cl, gol, p6g, peg, pge, so4
  2. Domain d6mpxa2: 6mpx A:115-227 [367244]
    automated match to d1li1a2
    complexed with cl, gol, p6g, peg, pge, so4
  3. Domain d6mpxa3: 6mpx A:228-336 [367245]
    automated match to d1li1a1
    complexed with cl, gol, p6g, peg, pge, so4
  4. Domain d6mpxa4: 6mpx A:337-450 [367246]
    automated match to d1li1a2
    complexed with cl, gol, p6g, peg, pge, so4
  5. Domain d6mpxa5: 6mpx A:451-561 [367247]
    automated match to d1li1a1
    complexed with cl, gol, p6g, peg, pge, so4
  6. Domain d6mpxa6: 6mpx A:562-676 [367248]
    automated match to d1li1a2
    complexed with cl, gol, p6g, peg, pge, so4

More info for Protein Noncollagenous (NC1) domain of collagen IV from d.169.1.6: Noncollagenous (NC1) domain of collagen IV

Timeline for Protein Noncollagenous (NC1) domain of collagen IV from d.169.1.6: Noncollagenous (NC1) domain of collagen IV:

Protein Noncollagenous (NC1) domain of collagen IV from d.169.1.6: Noncollagenous (NC1) domain of collagen IV first appeared in SCOP 1.61
Protein Noncollagenous (NC1) domain of collagen IV from d.169.1.6: Noncollagenous (NC1) domain of collagen IV appears in SCOPe 2.06
Protein Noncollagenous (NC1) domain of collagen IV from d.169.1.6: Noncollagenous (NC1) domain of collagen IV appears in the current release, SCOPe 2.08