Lineage for Protein: Noncollagenous (NC1) domain of collagen IV

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2558905Fold d.169: C-type lectin-like [56435] (1 superfamily)
    unusual fold
  4. 2558906Superfamily d.169.1: C-type lectin-like [56436] (9 families) (S)
  5. 2559542Family d.169.1.6: Noncollagenous (NC1) domain of collagen IV [75585] (2 proteins)
    duplication: consists of two subdomains of this fold; segment swapping within and between individual domains
    automatically mapped to Pfam PF01413
  6. 2559543Protein Noncollagenous (NC1) domain of collagen IV [75586] (2 species)

Species:

  1. 2559544Cow (Bos taurus) [TaxId:9913] [82820] (3 PDB entries)
    Uniprot P02462 1445-1667
    1. Domains for 1m3d:
      1. 2559605Domain d1m3da1: 1m3d A:5-114 [78533]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      2. 2559606Domain d1m3da2: 1m3d A:115-227 [78534]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      3. 2559607Domain d1m3db1: 1m3d B:6-114 [78535]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      4. 2559608Domain d1m3db2: 1m3d B:115-229 [78536]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      5. 2559609Domain d1m3dc1: 1m3d C:5-114 [78537]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      6. 2559610Domain d1m3dc2: 1m3d C:115-226 [78538]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      7. 2559611Domain d1m3dd1: 1m3d D:4-114 [78539]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      8. 2559612Domain d1m3dd2: 1m3d D:115-228 [78540]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      9. 2559613Domain d1m3de1: 1m3d E:4-114 [78541]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      10. 2559614Domain d1m3de2: 1m3d E:115-227 [78542]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      11. 2559615Domain d1m3df1: 1m3d F:4-114 [78543]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      12. 2559616Domain d1m3df2: 1m3d F:115-226 [78544]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      13. 2559617Domain d1m3dg1: 1m3d G:4-114 [78545]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      14. 2559618Domain d1m3dg2: 1m3d G:115-228 [78546]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      15. 2559619Domain d1m3dh1: 1m3d H:4-114 [78547]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      16. 2559620Domain d1m3dh2: 1m3d H:115-227 [78548]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      17. 2559621Domain d1m3di1: 1m3d I:5-114 [78549]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      18. 2559622Domain d1m3di2: 1m3d I:115-226 [78550]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      19. 2559623Domain d1m3dj1: 1m3d J:5-114 [78551]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      20. 2559624Domain d1m3dj2: 1m3d J:115-227 [78552]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      21. 2559625Domain d1m3dk1: 1m3d K:6-114 [78553]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      22. 2559626Domain d1m3dk2: 1m3d K:115-229 [78554]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      23. 2559627Domain d1m3dl1: 1m3d L:5-114 [78555]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      24. 2559628Domain d1m3dl2: 1m3d L:115-226 [78556]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
    2. Domains for 1t60:
      1. 2559557Domain d1t60a1: 1t60 A:6-114 [106497]
        complexed with cl, k, mpd
      2. 2559558Domain d1t60a2: 1t60 A:115-225 [106498]
        complexed with cl, k, mpd
      3. 2559559Domain d1t60b1: 1t60 B:6-114 [106499]
        complexed with cl, k, mpd
      4. 2559560Domain d1t60b2: 1t60 B:115-225 [106500]
        complexed with cl, k, mpd
      5. 2559561Domain d1t60c1: 1t60 C:3-114 [197523]
        automated match to d1m3df1
        complexed with cl, k, mpd
      6. 2559562Domain d1t60c2: 1t60 C:115-225 [197524]
        automated match to d1m3df2
        complexed with cl, k, mpd
      7. 2559563Domain d1t60d1: 1t60 D:6-114 [106501]
        complexed with cl, k, mpd
      8. 2559564Domain d1t60d2: 1t60 D:115-225 [106502]
        complexed with cl, k, mpd
      9. 2559565Domain d1t60e1: 1t60 E:6-114 [106503]
        complexed with cl, k, mpd
      10. 2559566Domain d1t60e2: 1t60 E:115-225 [106504]
        complexed with cl, k, mpd
      11. 2559567Domain d1t60f1: 1t60 F:5-114 [197525]
        automated match to d1m3dc1
        complexed with cl, k, mpd
      12. 2559568Domain d1t60f2: 1t60 F:115-226 [197526]
        automated match to d1m3dc2
        complexed with cl, k, mpd
      13. 2559569Domain d1t60g1: 1t60 G:6-114 [106505]
        complexed with cl, k, mpd
      14. 2559570Domain d1t60g2: 1t60 G:115-225 [106506]
        complexed with cl, k, mpd
      15. 2559571Domain d1t60h1: 1t60 H:6-114 [106507]
        complexed with cl, k, mpd
      16. 2559572Domain d1t60h2: 1t60 H:115-225 [106508]
        complexed with cl, k, mpd
      17. 2559573Domain d1t60i1: 1t60 I:2-114 [197527]
        automated match to d1m3df1
        complexed with cl, k, mpd
      18. 2559574Domain d1t60i2: 1t60 I:115-226 [197528]
        automated match to d1m3df2
        complexed with cl, k, mpd
      19. 2559575Domain d1t60j1: 1t60 J:6-114 [106509]
        complexed with cl, k, mpd
      20. 2559576Domain d1t60j2: 1t60 J:115-225 [106510]
        complexed with cl, k, mpd
      21. 2559577Domain d1t60k1: 1t60 K:6-114 [106511]
        complexed with cl, k, mpd
      22. 2559578Domain d1t60k2: 1t60 K:115-225 [106512]
        complexed with cl, k, mpd
      23. 2559579Domain d1t60l1: 1t60 L:6-114 [197529]
        automated match to d1m3dc1
        complexed with cl, k, mpd
      24. 2559580Domain d1t60l2: 1t60 L:115-226 [197530]
        automated match to d1m3dc2
        complexed with cl, k, mpd
      25. 2559581Domain d1t60m1: 1t60 M:6-114 [106513]
        complexed with cl, k, mpd
      26. 2559582Domain d1t60m2: 1t60 M:115-225 [106514]
        complexed with cl, k, mpd
      27. 2559583Domain d1t60n1: 1t60 N:6-114 [106515]
        complexed with cl, k, mpd
      28. 2559584Domain d1t60n2: 1t60 N:115-225 [106516]
        complexed with cl, k, mpd
      29. 2559585Domain d1t60o1: 1t60 O:3-114 [197531]
        automated match to d1m3df1
        complexed with cl, k, mpd
      30. 2559586Domain d1t60o2: 1t60 O:115-226 [197532]
        automated match to d1m3df2
        complexed with cl, k, mpd
      31. 2559587Domain d1t60p1: 1t60 P:6-114 [106517]
        complexed with cl, k, mpd
      32. 2559588Domain d1t60p2: 1t60 P:115-225 [106518]
        complexed with cl, k, mpd
      33. 2559589Domain d1t60q1: 1t60 Q:6-114 [106519]
        complexed with cl, k, mpd
      34. 2559590Domain d1t60q2: 1t60 Q:115-225 [106520]
        complexed with cl, k, mpd
      35. 2559591Domain d1t60r1: 1t60 R:3-114 [197533]
        automated match to d1m3df1
        complexed with cl, k, mpd
      36. 2559592Domain d1t60r2: 1t60 R:115-226 [197534]
        automated match to d1m3df2
        complexed with cl, k, mpd
      37. 2559593Domain d1t60s1: 1t60 S:6-114 [106521]
        complexed with cl, k, mpd
      38. 2559594Domain d1t60s2: 1t60 S:115-225 [106522]
        complexed with cl, k, mpd
      39. 2559595Domain d1t60t1: 1t60 T:6-114 [106523]
        complexed with cl, k, mpd
      40. 2559596Domain d1t60t2: 1t60 T:115-225 [106524]
        complexed with cl, k, mpd
      41. 2559597Domain d1t60u1: 1t60 U:3-114 [197535]
        automated match to d1m3df1
        complexed with cl, k, mpd
      42. 2559598Domain d1t60u2: 1t60 U:115-226 [197536]
        automated match to d1m3df2
        complexed with cl, k, mpd
      43. 2559599Domain d1t60v1: 1t60 V:6-114 [106525]
        complexed with cl, k, mpd
      44. 2559600Domain d1t60v2: 1t60 V:115-225 [106526]
        complexed with cl, k, mpd
      45. 2559601Domain d1t60w1: 1t60 W:6-114 [106527]
        complexed with cl, k, mpd
      46. 2559602Domain d1t60w2: 1t60 W:115-225 [106528]
        complexed with cl, k, mpd
      47. 2559603Domain d1t60x1: 1t60 X:4-114 [197537]
        automated match to d1m3df1
        complexed with cl, k, mpd
      48. 2559604Domain d1t60x2: 1t60 X:115-226 [197538]
        automated match to d1m3df2
        complexed with cl, k, mpd
    3. Domains for 1t61:
      1. 2559545Domain d1t61a1: 1t61 A:6-114 [106529]
        complexed with ca, cl, gol, k
      2. 2559546Domain d1t61a2: 1t61 A:115-225 [106530]
        complexed with ca, cl, gol, k
      3. 2559547Domain d1t61b1: 1t61 B:6-114 [106531]
        complexed with ca, cl, gol, k
      4. 2559548Domain d1t61b2: 1t61 B:115-225 [106532]
        complexed with ca, cl, gol, k
      5. 2559549Domain d1t61c1: 1t61 C:6-114 [106533]
        complexed with ca, cl, gol, k
      6. 2559550Domain d1t61c2: 1t61 C:115-225 [106534]
        complexed with ca, cl, gol, k
      7. 2559551Domain d1t61d1: 1t61 D:6-114 [106535]
        complexed with ca, cl, gol, k
      8. 2559552Domain d1t61d2: 1t61 D:115-225 [106536]
        complexed with ca, cl, gol, k
      9. 2559553Domain d1t61e1: 1t61 E:6-114 [106537]
        complexed with ca, cl, gol, k
      10. 2559554Domain d1t61e2: 1t61 E:115-225 [106538]
        complexed with ca, cl, gol, k
      11. 2559555Domain d1t61f1: 1t61 F:6-114 [106539]
        complexed with ca, cl, gol, k
      12. 2559556Domain d1t61f2: 1t61 F:115-225 [106540]
        complexed with ca, cl, gol, k
  2. 2559629Human (Homo sapiens) [TaxId:9606] [75587] (5 PDB entries)
    1. Domains for 1li1:
      1. 2559630Domain d1li1a1: 1li1 A:2-114 [73898]
        alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
        complexed with act
      2. 2559631Domain d1li1a2: 1li1 A:115-229 [73899]
        alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
        complexed with act
      3. 2559632Domain d1li1b1: 1li1 B:3-114 [73900]
        alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
        complexed with act
      4. 2559633Domain d1li1b2: 1li1 B:115-229 [73901]
        alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
        complexed with act
      5. 2559634Domain d1li1c1: 1li1 C:5-114 [73902]
        alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
        complexed with act
      6. 2559635Domain d1li1c2: 1li1 C:115-229 [73903]
        alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
        complexed with act
      7. 2559636Domain d1li1d1: 1li1 D:2-114 [73904]
        alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
        complexed with act
      8. 2559637Domain d1li1d2: 1li1 D:115-229 [73905]
        alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
        complexed with act
      9. 2559638Domain d1li1e1: 1li1 E:3-114 [73906]
        alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
        complexed with act
      10. 2559639Domain d1li1e2: 1li1 E:115-229 [73907]
        alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
        complexed with act
      11. 2559640Domain d1li1f1: 1li1 F:4-114 [73908]
        alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
        complexed with act
      12. 2559641Domain d1li1f2: 1li1 F:115-229 [73909]
        alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
        complexed with act
    2. Domains for 5nax:
      1. 3057421Domain d5naxb1: 5nax B:3-114 [357483]
        automated match to d1li1a1
        complexed with cl
      2. 3057422Domain d5naxb2: 5nax B:115-229 [357484]
        automated match to d1li1a2
        complexed with cl
      3. 3057426Domain d5naxc1: 5nax C:5-112 [357488]
        automated match to d1li1c1
        complexed with cl
      4. 3057427Domain d5naxc2: 5nax C:113-228 [357489]
        automated match to d1li1c2
        complexed with cl
      5. 3057435Domain d5naxa1: 5nax A:3-114 [357497]
        automated match to d1li1a1
        complexed with cl
      6. 3057436Domain d5naxa2: 5nax A:115-228 [357498]
        automated match to d1li1a2
        complexed with cl
      7. 3057477Domain d5naxe1: 5nax E:4-112 [357539]
        automated match to d1li1f1
        complexed with cl
      8. 3057478Domain d5naxe2: 5nax E:113-226 [357540]
        automated match to d1li1f2
        complexed with cl
      9. 3057485Domain d5naxf1: 5nax F:5-114 [357547]
        automated match to d1li1a1
        complexed with cl
      10. 3057486Domain d5naxf2: 5nax F:115-227 [357548]
        automated match to d1li1a2
        complexed with cl
      11. 3057493Domain d5naxd1: 5nax D:4-114 [357555]
        automated match to d1li1a1
        complexed with cl
      12. 3057494Domain d5naxd2: 5nax D:115-228 [357556]
        automated match to d1li1a2
        complexed with cl
    3. Domains for 5nay:
      1. 3057430Domain d5nayf1: 5nay F:1-114 [357492]
        automated match to d1li1a1
        complexed with cl, so4
      2. 3057431Domain d5nayf2: 5nay F:115-229 [357493]
        automated match to d1li1a2
        complexed with cl, so4
      3. 3057499Domain d5naye1: 5nay E:1-114 [357561]
        automated match to d1li1a1
        complexed with cl, so4
      4. 3057500Domain d5naye2: 5nay E:115-229 [357562]
        automated match to d1li1a2
        complexed with cl, so4
      5. 3057533Domain d5nayc1: 5nay C:2-114 [357595]
        automated match to d1li1a1
        complexed with cl, so4
      6. 3057534Domain d5nayc2: 5nay C:115-229 [357596]
        automated match to d1li1a2
        complexed with cl, so4
      7. 3057548Domain d5nayb1: 5nay B:2-114 [357610]
        automated match to d1li1a1
        complexed with cl, so4
      8. 3057549Domain d5nayb2: 5nay B:115-229 [357611]
        automated match to d1li1a2
        complexed with cl, so4
      9. 3057551Domain d5naya1: 5nay A:2-114 [357613]
        automated match to d1li1a1
        complexed with cl, so4
      10. 3057552Domain d5naya2: 5nay A:115-229 [357614]
        automated match to d1li1a2
        complexed with cl, so4
      11. 3057562Domain d5nayd1: 5nay D:2-114 [357624]
        automated match to d1li1a1
        complexed with cl, so4
      12. 3057563Domain d5nayd2: 5nay D:115-229 [357625]
        automated match to d1li1a2
        complexed with cl, so4
    4. Domains for 5nb2:
      1. 3057484Domain d5nb2b1: 5nb2 B:5-112 [357546]
        automated match to d1li1c1
      2. 3057519Domain d5nb2a1: 5nb2 A:3-112 [357581]
        automated match to d1li1f1
    5. Domains for 6mpx:
      1. 3067181Domain d6mpxa1: 6mpx A:4-114 [367243]
        automated match to d1li1a1
        complexed with cl, gol, p6g, peg, pge, so4
      2. 3067182Domain d6mpxa2: 6mpx A:115-227 [367244]
        automated match to d1li1a2
        complexed with cl, gol, p6g, peg, pge, so4
      3. 3067183Domain d6mpxa3: 6mpx A:228-336 [367245]
        automated match to d1li1a1
        complexed with cl, gol, p6g, peg, pge, so4
      4. 3067184Domain d6mpxa4: 6mpx A:337-450 [367246]
        automated match to d1li1a2
        complexed with cl, gol, p6g, peg, pge, so4
      5. 3067185Domain d6mpxa5: 6mpx A:451-561 [367247]
        automated match to d1li1a1
        complexed with cl, gol, p6g, peg, pge, so4
      6. 3067186Domain d6mpxa6: 6mpx A:562-676 [367248]
        automated match to d1li1a2
        complexed with cl, gol, p6g, peg, pge, so4

More info for Protein Noncollagenous (NC1) domain of collagen IV from d.169.1.6: Noncollagenous (NC1) domain of collagen IV

Timeline for Protein Noncollagenous (NC1) domain of collagen IV from d.169.1.6: Noncollagenous (NC1) domain of collagen IV:

  • Protein Noncollagenous (NC1) domain of collagen IV from d.169.1.6: Noncollagenous (NC1) domain of collagen IV first appeared in SCOP 1.61
  • Protein Noncollagenous (NC1) domain of collagen IV from d.169.1.6: Noncollagenous (NC1) domain of collagen IV appears in SCOPe 2.06