Lineage for Species: Jellyfish (Aequorea victoria) [TaxId: 6100]

  1. Root: SCOP 1.75
  2. 849709Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 857294Fold d.22: GFP-like [54510] (1 superfamily)
    beta-sheet folds into a barrel (n=11, S=14) around the central helix
  4. 857295Superfamily d.22.1: GFP-like [54511] (2 families) (S)
  5. 857296Family d.22.1.1: Fluorescent proteins [54512] (5 proteins)
  6. 857300Protein Green fluorescent protein, GFP [54513] (2 species)
  7. 857301Species Jellyfish (Aequorea victoria) [TaxId:6100] [54514] (53 PDB entries)
    Uniprot P42212

PDB entries in Species: Jellyfish (Aequorea victoria) [TaxId: 6100]:

  1. Domain(s) for 1b9c:
    1. 857356Domain d1b9ca_: 1b9c A: [38358]
    2. 857357Domain d1b9cb_: 1b9c B: [38359]
    3. 857358Domain d1b9cc_: 1b9c C: [38360]
    4. 857359Domain d1b9cd_: 1b9c D: [38361]
      complexed with cro; mutant
  2. Domain(s) for 1bfp:
    • 857341Domain d1bfpa_: 1bfp A: [38345]
      blue-emission variant
      complexed with iic; mutant
  3. Domain(s) for 1c4f:
  4. Domain(s) for 1cv7:
  5. Domain(s) for 1ema:
  6. Domain(s) for 1emb:
  7. Domain(s) for 1emc:
    1. 857342Domain d1emca_: 1emc A: [38352]
    2. 857343Domain d1emcb_: 1emc B: [38353]
    3. 857344Domain d1emcc_: 1emc C: [38354]
    4. 857345Domain d1emcd_: 1emc D: [38355]
      complexed with csy; mutant
  8. Domain(s) for 1eme:
  9. Domain(s) for 1emf:
  10. Domain(s) for 1emg:
  11. Domain(s) for 1emk:
  12. Domain(s) for 1eml:
  13. Domain(s) for 1emm:
  14. Domain(s) for 1f09:
  15. Domain(s) for 1f0b:
  16. Domain(s) for 1gfl:
    1. 857334Domain d1gfla_: 1gfl A: [38341]
    2. 857335Domain d1gflb_: 1gfl B: [38342]
      mutant
  17. Domain(s) for 1h6r:
    1. 857310Domain d1h6ra_: 1h6r A: [65683]
      a redox sensitive variant
    2. 857311Domain d1h6rb_: 1h6r B: [65684]
      a redox sensitive variant
    3. 857312Domain d1h6rc_: 1h6r C: [65685]
      a redox sensitive variant
      complexed with cl, pia; mutant
  18. Domain(s) for 1hcj:
    1. 857324Domain d1hcja_: 1hcj A: [65792]
      Photoproduct of the wild-type GFP
    2. 857325Domain d1hcjb_: 1hcj B: [65793]
      Photoproduct of the wild-type GFP
    3. 857326Domain d1hcjc_: 1hcj C: [65794]
      Photoproduct of the wild-type GFP
    4. 857327Domain d1hcjd_: 1hcj D: [65795]
      Photoproduct of the wild-type GFP
      complexed with csy; mutant
  19. Domain(s) for 1huy:
    • 857328Domain d1huya_: 1huy A: [61280]
      citrine, an improved yellow-emission variant
      complexed with cro; mutant
  20. Domain(s) for 1jby:
    • 857336Domain d1jbya_: 1jby A: [77102]
      a dual-wavelength emission variant
      complexed with cro; mutant
  21. Domain(s) for 1jbz:
    • 857316Domain d1jbza_: 1jbz A: [77103]
      a dual-wavelength emission variant
      complexed with cro, edo, mg; mutant
  22. Domain(s) for 1jc0:
    1. 857366Domain d1jc0a_: 1jc0 A: [90885]
    2. 857367Domain d1jc0b_: 1jc0 B: [90886]
    3. 857368Domain d1jc0c_: 1jc0 C: [90887]
      complexed with cro; mutant
  23. Domain(s) for 1jc1:
    1. 857353Domain d1jc1a_: 1jc1 A: [90888]
    2. 857354Domain d1jc1b_: 1jc1 B: [90889]
    3. 857355Domain d1jc1c_: 1jc1 C: [90890]
      complexed with cro; mutant
  24. Domain(s) for 1kp5:
    1. 857348Domain d1kp5a_: 1kp5 A: [72842]
      cyclic variant with linked natural termini
    2. 857349Domain d1kp5b_: 1kp5 B: [72843]
      cyclic variant with linked natural termini
      complexed with csy, so4; mutant
  25. Domain(s) for 1kyp:
    • 857304Domain d1kypa_: 1kyp A: [73280]
      Zn biosensor, apo form
      complexed with crg, mo6; mutant
  26. Domain(s) for 1kyr:
    • 857308Domain d1kyra_: 1kyr A: [73287]
      Zn biosensor, Cu-bound form
      complexed with crg, cu, mg; mutant
  27. Domain(s) for 1kys:
    • 857306Domain d1kysa_: 1kys A: [73288]
      Zn biosensor, Zn-bound form
      complexed with crg, zn, zn3; mutant
  28. Domain(s) for 1myw:
    • 857337Domain d1mywa_: 1myw A: [79678]
      yellow-emission variant
      complexed with cr2; mutant
  29. Domain(s) for 1oxd:
    • 857302Domain d1oxda_: 1oxd A: [93687]
      "gold" class of GFP; cyan fluorescent protein
      complexed with nyc; mutant
  30. Domain(s) for 1oxe:
    • 857303Domain d1oxea_: 1oxe A: [93688]
      "gold" class of GFP; cyan fluorescent protein
      complexed with nyc; mutant
  31. Domain(s) for 1oxf:
    • 857319Domain d1oxfa_: 1oxf A: [93689]
      "gold" class of GFP; cyan fluorescent protein
      complexed with 4in, 5za
  32. Domain(s) for 1q4a:
  33. Domain(s) for 1q4b:
  34. Domain(s) for 1q4c:
  35. Domain(s) for 1q4d:
  36. Domain(s) for 1q4e:
  37. Domain(s) for 1q73:
  38. Domain(s) for 1qxt:
  39. Domain(s) for 1qy3:
  40. Domain(s) for 1qyf:
  41. Domain(s) for 1qyo:
  42. Domain(s) for 1qyq:
  43. Domain(s) for 1rm9:
  44. Domain(s) for 1rmm:
  45. Domain(s) for 1rmo:
  46. Domain(s) for 1rmp:
  47. Domain(s) for 1rrx:
  48. Domain(s) for 1s6z:
  49. Domain(s) for 1yfp:
    1. 857360Domain d1yfpa_: 1yfp A: [38362]
      yellow-emission variant
    2. 857361Domain d1yfpb_: 1yfp B: [38363]
      yellow-emission variant
      complexed with cro; mutant
  50. Domain(s) for 2emd:
  51. Domain(s) for 2emn:
  52. Domain(s) for 2emo:
  53. Domain(s) for 2yfp:
    • 857365Domain d2yfpa_: 2yfp A: [38364]
      yellow-emission variant
      complexed with cro; mutant

More info for Species Jellyfish (Aequorea victoria) [TaxId:6100] from d.22.1.1 Green fluorescent protein, GFP

Timeline for Species Jellyfish (Aequorea victoria) [TaxId:6100] from d.22.1.1 Green fluorescent protein, GFP: