Lineage for Protein: Green fluorescent protein, GFP

  1. Root: SCOP 1.75
  2. 849709Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 857294Fold d.22: GFP-like [54510] (1 superfamily)
    beta-sheet folds into a barrel (n=11, S=14) around the central helix
  4. 857295Superfamily d.22.1: GFP-like [54511] (2 families) (S)
  5. 857296Family d.22.1.1: Fluorescent proteins [54512] (5 proteins)
  6. 857300Protein Green fluorescent protein, GFP [54513] (2 species)

Species:

  1. 857301Jellyfish (Aequorea victoria) [TaxId:6100] [54514] (53 PDB entries)
    Uniprot P42212
    1. Domains for 1b9c:
      1. 857356Domain d1b9ca_: 1b9c A: [38358]
      2. 857357Domain d1b9cb_: 1b9c B: [38359]
      3. 857358Domain d1b9cc_: 1b9c C: [38360]
      4. 857359Domain d1b9cd_: 1b9c D: [38361]
        complexed with cro; mutant
    2. Domain for 1bfp:
      • 857341Domain d1bfpa_: 1bfp A: [38345]
        blue-emission variant
        complexed with iic; mutant
    3. Domain for 1c4f:
    4. Domain for 1cv7:
    5. Domain for 1ema:
    6. Domain for 1emb:
    7. Domains for 1emc:
      1. 857342Domain d1emca_: 1emc A: [38352]
      2. 857343Domain d1emcb_: 1emc B: [38353]
      3. 857344Domain d1emcc_: 1emc C: [38354]
      4. 857345Domain d1emcd_: 1emc D: [38355]
        complexed with csy; mutant
    8. Domain for 1eme:
    9. Domain for 1emf:
    10. Domain for 1emg:
    11. Domain for 1emk:
    12. Domain for 1eml:
    13. Domain for 1emm:
    14. Domain for 1f09:
    15. Domain for 1f0b:
    16. Domains for 1gfl:
      1. 857334Domain d1gfla_: 1gfl A: [38341]
      2. 857335Domain d1gflb_: 1gfl B: [38342]
        mutant
    17. Domains for 1h6r:
      1. 857310Domain d1h6ra_: 1h6r A: [65683]
        a redox sensitive variant
      2. 857311Domain d1h6rb_: 1h6r B: [65684]
        a redox sensitive variant
      3. 857312Domain d1h6rc_: 1h6r C: [65685]
        a redox sensitive variant
        complexed with cl, pia; mutant
    18. Domains for 1hcj:
      1. 857324Domain d1hcja_: 1hcj A: [65792]
        Photoproduct of the wild-type GFP
      2. 857325Domain d1hcjb_: 1hcj B: [65793]
        Photoproduct of the wild-type GFP
      3. 857326Domain d1hcjc_: 1hcj C: [65794]
        Photoproduct of the wild-type GFP
      4. 857327Domain d1hcjd_: 1hcj D: [65795]
        Photoproduct of the wild-type GFP
        complexed with csy; mutant
    19. Domain for 1huy:
      • 857328Domain d1huya_: 1huy A: [61280]
        citrine, an improved yellow-emission variant
        complexed with cro; mutant
    20. Domain for 1jby:
      • 857336Domain d1jbya_: 1jby A: [77102]
        a dual-wavelength emission variant
        complexed with cro; mutant
    21. Domain for 1jbz:
      • 857316Domain d1jbza_: 1jbz A: [77103]
        a dual-wavelength emission variant
        complexed with cro, edo, mg; mutant
    22. Domains for 1jc0:
      1. 857366Domain d1jc0a_: 1jc0 A: [90885]
      2. 857367Domain d1jc0b_: 1jc0 B: [90886]
      3. 857368Domain d1jc0c_: 1jc0 C: [90887]
        complexed with cro; mutant
    23. Domains for 1jc1:
      1. 857353Domain d1jc1a_: 1jc1 A: [90888]
      2. 857354Domain d1jc1b_: 1jc1 B: [90889]
      3. 857355Domain d1jc1c_: 1jc1 C: [90890]
        complexed with cro; mutant
    24. Domains for 1kp5:
      1. 857348Domain d1kp5a_: 1kp5 A: [72842]
        cyclic variant with linked natural termini
      2. 857349Domain d1kp5b_: 1kp5 B: [72843]
        cyclic variant with linked natural termini
        complexed with csy, so4; mutant
    25. Domain for 1kyp:
      • 857304Domain d1kypa_: 1kyp A: [73280]
        Zn biosensor, apo form
        complexed with crg, mo6; mutant
    26. Domain for 1kyr:
      • 857308Domain d1kyra_: 1kyr A: [73287]
        Zn biosensor, Cu-bound form
        complexed with crg, cu, mg; mutant
    27. Domain for 1kys:
      • 857306Domain d1kysa_: 1kys A: [73288]
        Zn biosensor, Zn-bound form
        complexed with crg, zn, zn3; mutant
    28. Domain for 1myw:
      • 857337Domain d1mywa_: 1myw A: [79678]
        yellow-emission variant
        complexed with cr2; mutant
    29. Domain for 1oxd:
      • 857302Domain d1oxda_: 1oxd A: [93687]
        "gold" class of GFP; cyan fluorescent protein
        complexed with nyc; mutant
    30. Domain for 1oxe:
      • 857303Domain d1oxea_: 1oxe A: [93688]
        "gold" class of GFP; cyan fluorescent protein
        complexed with nyc; mutant
    31. Domain for 1oxf:
      • 857319Domain d1oxfa_: 1oxf A: [93689]
        "gold" class of GFP; cyan fluorescent protein
        complexed with 4in, 5za
    32. Domain for 1q4a:
    33. Domain for 1q4b:
    34. Domain for 1q4c:
    35. Domain for 1q4d:
    36. Domain for 1q4e:
    37. Domain for 1q73:
    38. Domain for 1qxt:
    39. Domain for 1qy3:
    40. Domain for 1qyf:
    41. Domain for 1qyo:
    42. Domain for 1qyq:
    43. Domain for 1rm9:
    44. Domain for 1rmm:
    45. Domain for 1rmo:
    46. Domain for 1rmp:
    47. Domain for 1rrx:
    48. Domain for 1s6z:
    49. Domains for 1yfp:
      1. 857360Domain d1yfpa_: 1yfp A: [38362]
        yellow-emission variant
      2. 857361Domain d1yfpb_: 1yfp B: [38363]
        yellow-emission variant
        complexed with cro; mutant
    50. Domain for 2emd:
    51. Domain for 2emn:
    52. Domain for 2emo:
    53. Domain for 2yfp:
      • 857365Domain d2yfpa_: 2yfp A: [38364]
        yellow-emission variant
        complexed with cro; mutant
  2. 857373Renilla reniformis [TaxId:6136] [160126] (1 PDB entry)
    Uniprot Q963I9 7-226

More info for Protein Green fluorescent protein, GFP from d.22.1.1: Fluorescent proteins

Timeline for Protein Green fluorescent protein, GFP from d.22.1.1: Fluorescent proteins: