SCOP 1.75: Domain d1yfpb_: 1yfp B:

Lineage for d1yfpb_ (1yfp B:)

1. Root: SCOP 1.75

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.22: GFP-like [54510] (1 superfamily)
   beta-sheet folds into a barrel (n=11, S=14) around the central helix

4. Superfamily d.22.1: GFP-like [54511] (2 families)

5. Family d.22.1.1: Fluorescent proteins [54512] (5 proteins)

6. Protein Green fluorescent protein, GFP [54513] (2 species)

7. Species Jellyfish (Aequorea victoria) [TaxId:6100] [54514] (53 PDB entries)
   Uniprot P42212

8. Domain d1yfpb_: 1yfp B: [38363]
   yellow-emission variant
   complexed with cro; mutant

Details for d1yfpb_

PDB Entry: 1yfp, 2.5 Å

PDB Description: structure of yellow-emission variant of gfp

PDB Compounds: (B:) yellow fluorescent protein

SCOP Domain Sequences for d1yfpb_:

Sequence; same for both SEQRES and ATOM records:

>d1yfpb_ d.22.1.1 (B:) Green fluorescent protein, GFP {Jellyfish (Aequorea victoria) [TaxId: 6100]}
kgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptlvt
tfgyglqcfarypdhmkrhdffksampegyvqertiffkddgnyktraevkfegdtlvnr
ielkgidfkedgnilghkleynynshnvyimadkqkngikvnfkirhniedgsvqladhy
qqntpigdgpvllpdnhylsyqsalskdpnekrdhmvllefvtaagi

Timeline for d1yfpb_:

• d1yfpb_ first appeared (with stable ids) in SCOP 1.55
  
• d1yfpb_ appears in SCOP 1.73
  
• d1yfpb_ appears in SCOPe 2.01
  
• d1yfpb_ appears in the current release, SCOPe 2.08