SCOP 1.67: Protein: dTDP-4-dehydrorhamnose 3,5-epimerase RmlC

Lineage for Protein: dTDP-4-dehydrorhamnose 3,5-epimerase RmlC

Root: SCOP 1.67
Class b: All beta proteins [48724] (141 folds)

Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
one turn of helix is made by two pairs of antiparallel strands linked with short turns
has appearance of a sandwich of distinct architecture and jelly-roll topology

Superfamily b.82.1: RmlC-like cupins [51182] (12 families)
Family b.82.1.1: dTDP-sugar isomerase [51183] (2 proteins)
Protein dTDP-4-dehydrorhamnose 3,5-epimerase RmlC [51184] (5 species)
synonym: dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase

Species:

Archaeon Methanobacterium thermoautotrophicum [TaxId:145262] [51186] (2 PDB entries)
1. Domain for 1ep0:
  - Domain d1ep0a_: 1ep0 A: [28080]
2. Domain for 1epz:
  - Domain d1epza_: 1epz A: [28081]
    complexed with tyd
Mycobacterium tuberculosis [TaxId:1773] [101971] (2 PDB entries)
1. Domains for 1pm7:
  1. Domain d1pm7a_: 1pm7 A: [94895]
  2. Domain d1pm7b_: 1pm7 B: [94896]
    complexed with act, gol
2. Domain for 1upi:
  - Domain d1upia_: 1upi A: [99757]
Pseudomonas aeruginosa [TaxId:287] [101972] (1 PDB entry)
- Domain for 1rtv:
  - Domain d1rtva_: 1rtv A: [97822]
    complexed with tar
Salmonella typhimurium [TaxId:90371] [51185] (2 PDB entries)
1. Domains for 1dzr:
  1. Domain d1dzra_: 1dzr A: [28076]
  2. Domain d1dzrb_: 1dzr B: [28077]
    complexed with gol, so4
2. Domains for 1dzt:
  1. Domain d1dzta_: 1dzt A: [28078]
  2. Domain d1dztb_: 1dzt B: [28079]
    complexed with aty, gol, so4, tpe
Streptococcus suis [89402] (3 PDB entries)
1. Domains for 1nxm:
  1. Domain d1nxma_: 1nxm A: [86385]
  2. Domain d1nxmb_: 1nxm B: [86386]
2. Domains for 1nyw:
  1. Domain d1nywa_: 1nyw A: [86429]
  2. Domain d1nywb_: 1nyw B: [86430]
    complexed with dau
3. Domains for 1nzc:
  1. Domain d1nzca_: 1nzc A: [86445]
  2. Domain d1nzcb_: 1nzc B: [86446]
  3. Domain d1nzcc_: 1nzc C: [86447]
  4. Domain d1nzcd_: 1nzc D: [86448]
    complexed with ni, tdx

More info for Protein dTDP-4-dehydrorhamnose 3,5-epimerase RmlC from b.82.1.1: dTDP-sugar isomerase

Timeline for Protein dTDP-4-dehydrorhamnose 3,5-epimerase RmlC from b.82.1.1: dTDP-sugar isomerase:

Protein dTDP-4-dehydrorhamnose 3,5-epimerase RmlC from b.82.1.1: dTDP-sugar isomerase first appeared (with stable ids) in SCOP 1.55, called Protein dTDP-4-dehydrorhamnose 3,5-epimerase RmlC from b.82.1.1: dTDP-4-dehydrorhamnose 3,5-epimerase RmlC
Protein dTDP-4-dehydrorhamnose 3,5-epimerase RmlC from b.82.1.1: dTDP-sugar isomerase was called Protein dTDP-4-dehydrorhamnose 3,5-epimerase RmlC from b.82.1.1: dTDP-4-dehydrorhamnose 3,5-epimerase RmlC in SCOP 1.65
Protein dTDP-4-dehydrorhamnose 3,5-epimerase RmlC from b.82.1.1: dTDP-sugar isomerase appears in SCOP 1.69
Protein dTDP-4-dehydrorhamnose 3,5-epimerase RmlC from b.82.1.1: dTDP-sugar isomerase appears in the current release, SCOPe 2.08