Lineage for Family b.1.1.2: C1 set domains (antibody constant domain-like)

  1. Root: SCOP 1.73
  2. 651986Class b: All beta proteins [48724] (165 folds)
  3. 651987Fold b.1: Immunoglobulin-like beta-sandwich [48725] (27 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 651988Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 654118Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (23 proteins)

Proteins:

  1. 654119beta2-microglobulin [88600] (4 species)
    1. 654120Species Cow (Bos taurus) [TaxId:9913] [48946] (1 PDB entry)
    2. 654122Species Human (Homo sapiens) [TaxId:9606] [88602] (157 PDB entries)
    3. 654353Species Mouse (Mus musculus) [TaxId:10090] [88603] (85 PDB entries)
    4. 654488Species Rat (Rattus norvegicus) [TaxId:10116] [88601] (6 PDB entries)
  2. 654498CD1, alpha-3 domain [88615] (3 species)
    1. 654499Species Human (Homo sapiens), CD1a [TaxId:9606] [101513] (3 PDB entries)
    2. 654505Species Human (Homo sapiens), CD1b [TaxId:9606] [88617] (3 PDB entries)
    3. 654509Species Mouse (Mus musculus) [TaxId:10090] [88616] (6 PDB entries)
  3. 654519Class I MHC homolog, alpha-3 domain [88610] (4 species)
    gamma, delta T-cell ligand
    1. 654520Species Human (Homo sapiens), Mic-a [TaxId:9606] [48968] (2 PDB entries)
    2. 654523Species Human (Homo sapiens), Mic-b [TaxId:9606] [74826] (1 PDB entry)
    3. 654525Species Mouse (Mus musculus), t10 [TaxId:10090] [101512] (1 PDB entry)
    4. 654530Species Mouse (Mus musculus), t22 [TaxId:10090] [88611] (2 PDB entries)
  4. 654537Class I MHC, alpha-3 domain [88604] (3 species)
    1. 654538Species Human (Homo sapiens) [TaxId:9606] [88605] (130 PDB entries)
    2. 654719Species Mouse (Mus musculus) [TaxId:10090] [88606] (78 PDB entries)
    3. 654844Species Rat (Rattus norvegicus), RT1-AA [TaxId:10116] [88607] (3 PDB entries)
  5. 654849Class II MHC alpha chain, C-terminal domain [88618] (6 species)
    1. 654850Species Human (Homo sapiens), HLA-DM [TaxId:9606] [88619] (1 PDB entry)
      probably orthologous to the mouse H2-DM
    2. 654852Species Human (Homo sapiens), HLA-DQ group [TaxId:9606] [88623] (3 PDB entries)
      probably orthologous to the mouse I-A group
    3. 654857Species Human (Homo sapiens), HLA-DR group [TaxId:9606] [88621] (29 PDB entries)
      probably orthologous to the mouse I-E group
    4. 654897Species Mouse (Mus musculus), H2-DM [TaxId:10090] [88620] (1 PDB entry)
      probably orthologous to the human HLA-DM
    5. 654899Species Mouse (Mus musculus), I-A group [TaxId:10090] [88624] (20 PDB entries)
      probably orthologous to the human HLA-DQ group
    6. 654935Species Mouse (Mus musculus), I-E group [TaxId:10090] [88622] (9 PDB entries)
      probably orthologous to the human HLA-DR group
  6. 654956Class II MHC beta chain, C-terminal domain [88625] (6 species)
    1. 654957Species Human (Homo sapiens), HLA-DM [TaxId:9606] [88626] (1 PDB entry)
      probably orthologous to the mouse H2-DM
    2. 654959Species Human (Homo sapiens), HLA-DQ group [TaxId:9606] [88630] (3 PDB entries)
      probably orthologous to the mouse I-A group
    3. 654964Species Human (Homo sapiens), HLA-DR group [TaxId:9606] [88628] (38 PDB entries)
      probably orthologous to the mouse I-E group
    4. 655022Species Mouse (Mus musculus), H2-DM [TaxId:10090] [88627] (1 PDB entry)
      probably orthologous to the human HLA-DM
    5. 655024Species Mouse (Mus musculus), I-A group [TaxId:10090] [88631] (11 PDB entries)
      probably orthologous to the human HLA-DQ group
    6. 655042Species Mouse (Mus musculus), I-E group [TaxId:10090] [88629] (9 PDB entries)
      probably orthologous to the human HLA-DR group
  7. 655063Fc (IgG) receptor, alpha-3 domain [88612] (2 species)
    1. 655064Species Human (Homo sapiens) [TaxId:9606] [88614] (1 PDB entry)
    2. 655066Species Rat (Rattus norvegicus) [TaxId:10116] [88613] (3 PDB entries)
  8. 655072Hemochromatosis protein Hfe, alpha-3 domain [88608] (1 species)
  9. 655079Immunoglobulin heavy chain alpha constant domain 1, CH1-alpha [88580] (1 species)
  10. 655084Immunoglobulin heavy chain alpha constant domain 2, CH2-alpha [89181] (1 species)
  11. 655088Immunoglobulin heavy chain alpha constant domain 3, CH3-alpha [89183] (1 species)
  12. 655092Immunoglobulin heavy chain epsilon constant domain 2, CH2-epsilon [88594] (1 species)
  13. 655097Immunoglobulin heavy chain epsilon constant domain 3, CH3-epsilon [88596] (1 species)
  14. 655104Immunoglobulin heavy chain epsilon constant domain 4, CH4-epsilon [88598] (1 species)
  15. 655111Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma [88574] (5 species)
    1. 655112Species Hamster (Cricetulus griseus) [TaxId:10029] [88579] (1 PDB entry)
    2. 655115Species Human (Homo sapiens) [TaxId:9606] [88575] (150 PDB entries)
      including humanized antibodies (chimeric proteins with human constant domains)
    3. 655348Species Mouse (Mus musculus) [TaxId:10090] [88576] (330 PDB entries)
    4. 655779Species Mouse (Mus musculus), gamma3 [TaxId:10090] [88577] (8 PDB entries)
    5. 655793Species Rat (Rattus norvegicus) [TaxId:10116] [88578] (4 PDB entries)
  16. 655804Immunoglobulin heavy chain gamma constant domain 2, CH2-gamma [88584] (4 species)
    1. 655805Species Human (Homo sapiens) [TaxId:9606] [88585] (25 PDB entries)
    2. 655850Species Mouse (Mus musculus) [TaxId:10090] [88586] (1 PDB entry)
    3. 655853Species Mouse (Mus musculus), gamma2 [TaxId:10090] [88587] (1 PDB entry)
    4. 655856Species Rat (Rattus norvegicus) [TaxId:10116] [88588] (2 PDB entries)
  17. 655861Immunoglobulin heavy chain gamma constant domain 3, CH3-gamma [88589] (5 species)
    1. 655862Species Guinea pig (Cavia porcellus) [TaxId:10141] [49123] (1 PDB entry)
    2. 655864Species Human (Homo sapiens) [TaxId:9606] [88590] (26 PDB entries)
    3. 655913Species Mouse (Mus musculus) [TaxId:10090] [88591] (2 PDB entries)
    4. 655918Species Mouse (Mus musculus), gamma2 [TaxId:10090] [88592] (1 PDB entry)
    5. 655921Species Rat (Rattus norvegicus) [TaxId:10116] [88593] (2 PDB entries)
  18. 655926Immunoglobulin heavy chain mu constant domain 1, CH1-mu [88582] (1 species)
  19. 655938Immunoglobulin light chain kappa constant domain, CL-kappa [88566] (3 species)
    1. 655939Species Human (Homo sapiens) [TaxId:9606] [88569] (125 PDB entries)
      including humanized antibodies (chimeric proteins with human constant domains)
    2. 656129Species Mouse (Mus musculus) [TaxId:10090] [88567] (311 PDB entries)
    3. 656543Species Rat (Rattus norvegicus) [TaxId:10116] [88568] (5 PDB entries)
  20. 656556Immunoglobulin light chain lambda constant domain, CL-lambda [88570] (3 species)
    1. 656557Species Hamster (Cricetulus griseus) [TaxId:10029] [88573] (1 PDB entry)
    2. 656560Species Human (Homo sapiens) [TaxId:9606] [88572] (43 PDB entries)
    3. 656637Species Mouse (Mus musculus) [TaxId:10090] [88571] (21 PDB entries)
  21. 656665Immunomodulatory protein m144, alpha-3 domain [110048] (1 species)
  22. 656668T-cell antigen receptor [49125] (6 species)
    1. 656669Species Human (Homo sapiens), alpha-chain [TaxId:9606] [49127] (9 PDB entries)
    2. 656679Species Human (Homo sapiens), beta-chain [TaxId:9606] [49129] (16 PDB entries)
    3. 656703Species Human (Homo sapiens), delta-chain [TaxId:9606] [63662] (1 PDB entry)
    4. 656708Species Human (Homo sapiens), gamma-chain [TaxId:9606] [63661] (1 PDB entry)
    5. 656713Species Mouse (Mus musculus), alpha-chain [TaxId:10090] [49126] (7 PDB entries)
    6. 656726Species Mouse (Mus musculus), beta-chain [TaxId:10090] [49128] (11 PDB entries)
  23. 656747Zinc-alpha-2-glycoprotein, ZAG, alpha-3 domain [48965] (1 species)
    fat depleting factor related to class I MHC

More info for Family b.1.1.2: C1 set domains (antibody constant domain-like)

Timeline for Family b.1.1.2: C1 set domains (antibody constant domain-like):