Lineage for Family b.1.1.2: C1 set domains (antibody constant domain-like)

  1. Root: SCOP 1.71
  2. 546417Class b: All beta proteins [48724] (149 folds)
  3. 546418Fold b.1: Immunoglobulin-like beta-sandwich [48725] (25 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 546419Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 548299Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (23 proteins)

Proteins:

  1. 548300beta2-microglobulin [88600] (4 species)
    1. 548301Species Cow (Bos taurus) [TaxId:9913] [48946] (1 PDB entry)
    2. 548303Species Human (Homo sapiens) [TaxId:9606] [88602] (91 PDB entries)
    3. 548438Species Mouse (Mus musculus) [TaxId:10090] [88603] (66 PDB entries)
    4. 548545Species Rat (Rattus norvegicus) [TaxId:10116] [88601] (6 PDB entries)
  2. 548555CD1, alpha-3 domain [88615] (3 species)
    1. 548556Species Human (Homo sapiens), CD1a [TaxId:9606] [101513] (1 PDB entry)
    2. 548559Species Human (Homo sapiens), CD1b [TaxId:9606] [88617] (3 PDB entries)
    3. 548563Species Mouse (Mus musculus) [TaxId:10090] [88616] (1 PDB entry)
  3. 548566Class I MHC homolog, alpha-3 domain [88610] (4 species)
    gamma, delta T-cell ligand
    1. 548567Species Human (Homo sapiens), Mic-a [TaxId:9606] [48968] (2 PDB entries)
    2. 548570Species Human (Homo sapiens), Mic-b [TaxId:9606] [74826] (1 PDB entry)
    3. 548572Species Mouse (Mus musculus), t10 [TaxId:10090] [101512] (1 PDB entry)
    4. 548577Species Mouse (Mus musculus), t22 [TaxId:10090] [88611] (1 PDB entry)
  4. 548582Class I MHC, alpha-3 domain [88604] (3 species)
    1. 548583Species Human (Homo sapiens) [TaxId:9606] [88605] (76 PDB entries)
    2. 548690Species Mouse (Mus musculus) [TaxId:10090] [88606] (66 PDB entries)
    3. 548796Species Rat (Rattus norvegicus), RT1-AA [TaxId:10116] [88607] (3 PDB entries)
  5. 548801Class II MHC alpha chain, C-terminal domain [88618] (6 species)
    1. 548802Species Human (Homo sapiens), HLA-DM [TaxId:9606] [88619] (1 PDB entry)
      probably orthologous to the mouse H2-DM
    2. 548804Species Human (Homo sapiens), HLA-DQ group [TaxId:9606] [88623] (3 PDB entries)
      probably orthologous to the mouse I-A group
    3. 548809Species Human (Homo sapiens), HLA-DR group [TaxId:9606] [88621] (29 PDB entries)
      probably orthologous to the mouse I-E group
    4. 548849Species Mouse (Mus musculus), H2-DM [TaxId:10090] [88620] (1 PDB entry)
      probably orthologous to the human HLA-DM
    5. 548851Species Mouse (Mus musculus), I-A group [TaxId:10090] [88624] (10 PDB entries)
      probably orthologous to the human HLA-DQ group
    6. 548867Species Mouse (Mus musculus), I-E group [TaxId:10090] [88622] (9 PDB entries)
      probably orthologous to the human HLA-DR group
  6. 548888Class II MHC beta chain, C-terminal domain [88625] (6 species)
    1. 548889Species Human (Homo sapiens), HLA-DM [TaxId:9606] [88626] (1 PDB entry)
      probably orthologous to the mouse H2-DM
    2. 548891Species Human (Homo sapiens), HLA-DQ group [TaxId:9606] [88630] (3 PDB entries)
      probably orthologous to the mouse I-A group
    3. 548896Species Human (Homo sapiens), HLA-DR group [TaxId:9606] [88628] (29 PDB entries)
      probably orthologous to the mouse I-E group
    4. 548936Species Mouse (Mus musculus), H2-DM [TaxId:10090] [88627] (1 PDB entry)
      probably orthologous to the human HLA-DM
    5. 548938Species Mouse (Mus musculus), I-A group [TaxId:10090] [88631] (10 PDB entries)
      probably orthologous to the human HLA-DQ group
    6. 548954Species Mouse (Mus musculus), I-E group [TaxId:10090] [88629] (9 PDB entries)
      probably orthologous to the human HLA-DR group
  7. 548975Fc (IgG) receptor, alpha-3 domain [88612] (2 species)
    1. 548976Species Human (Homo sapiens) [TaxId:9606] [88614] (1 PDB entry)
    2. 548978Species Rat (Rattus norvegicus) [TaxId:10116] [88613] (3 PDB entries)
  8. 548984Hemochromatosis protein Hfe, alpha-3 domain [88608] (1 species)
  9. 548991Immunoglobulin heavy chain alpha constant domain 1, CH1-alpha [88580] (1 species)
  10. 548996Immunoglobulin heavy chain alpha constant domain 2, CH2-alpha [89181] (1 species)
  11. 549000Immunoglobulin heavy chain alpha constant domain 3, CH3-alpha [89183] (1 species)
  12. 549004Immunoglobulin heavy chain epsilon constant domain 2, CH2-epsilon [88594] (1 species)
  13. 549009Immunoglobulin heavy chain epsilon constant domain 3, CH3-epsilon [88596] (1 species)
  14. 549016Immunoglobulin heavy chain epsilon constant domain 4, CH4-epsilon [88598] (1 species)
  15. 549023Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma [88574] (5 species)
    1. 549024Species Hamster (Cricetulus griseus) [TaxId:10029] [88579] (1 PDB entry)
    2. 549027Species Human (Homo sapiens) [TaxId:9606] [88575] (105 PDB entries)
      including humanized antibodies (chimeric proteins with human constant domains)
    3. 549177Species Mouse (Mus musculus) [TaxId:10090] [88576] (302 PDB entries)
    4. 549566Species Mouse (Mus musculus), gamma3 [TaxId:10090] [88577] (8 PDB entries)
    5. 549580Species Rat (Rattus norvegicus) [TaxId:10116] [88578] (4 PDB entries)
  16. 549591Immunoglobulin heavy chain gamma constant domain 2, CH2-gamma [88584] (4 species)
    1. 549592Species Human (Homo sapiens) [TaxId:9606] [88585] (22 PDB entries)
    2. 549630Species Mouse (Mus musculus) [TaxId:10090] [88586] (1 PDB entry)
    3. 549633Species Mouse (Mus musculus), gamma2 [TaxId:10090] [88587] (1 PDB entry)
    4. 549636Species Rat (Rattus norvegicus) [TaxId:10116] [88588] (2 PDB entries)
  17. 549641Immunoglobulin heavy chain gamma constant domain 3, CH3-gamma [88589] (5 species)
    1. 549642Species Guinea pig (Cavia porcellus) [TaxId:10141] [49123] (1 PDB entry)
    2. 549644Species Human (Homo sapiens) [TaxId:9606] [88590] (22 PDB entries)
    3. 549682Species Mouse (Mus musculus) [TaxId:10090] [88591] (2 PDB entries)
    4. 549687Species Mouse (Mus musculus), gamma2 [TaxId:10090] [88592] (1 PDB entry)
    5. 549690Species Rat (Rattus norvegicus) [TaxId:10116] [88593] (2 PDB entries)
  18. 549695Immunoglobulin heavy chain mu constant domain 1, CH1-mu [88582] (1 species)
  19. 549707Immunoglobulin light chain kappa constant domain, CL-kappa [88566] (3 species)
    1. 549708Species Human (Homo sapiens) [TaxId:9606] [88569] (100 PDB entries)
      including humanized antibodies (chimeric proteins with human constant domains)
    2. 549856Species Mouse (Mus musculus) [TaxId:10090] [88567] (284 PDB entries)
    3. 550220Species Rat (Rattus norvegicus) [TaxId:10116] [88568] (4 PDB entries)
  20. 550231Immunoglobulin light chain lambda constant domain, CL-lambda [88570] (3 species)
    1. 550232Species Hamster (Cricetulus griseus) [TaxId:10029] [88573] (1 PDB entry)
    2. 550235Species Human (Homo sapiens) [TaxId:9606] [88572] (42 PDB entries)
    3. 550310Species Mouse (Mus musculus) [TaxId:10090] [88571] (21 PDB entries)
  21. 550338Immunomodulatory protein m144, alpha-3 domain [110048] (1 species)
  22. 550341T-cell antigen receptor [49125] (6 species)
    1. 550342Species Human (Homo sapiens), alpha-chain [TaxId:9606] [49127] (9 PDB entries)
    2. 550352Species Human (Homo sapiens), beta-chain [TaxId:9606] [49129] (11 PDB entries)
    3. 550365Species Human (Homo sapiens), delta-chain [TaxId:9606] [63662] (1 PDB entry)
    4. 550370Species Human (Homo sapiens), gamma-chain [TaxId:9606] [63661] (1 PDB entry)
    5. 550375Species Mouse (Mus musculus), alpha-chain [TaxId:10090] [49126] (6 PDB entries)
    6. 550387Species Mouse (Mus musculus), beta-chain [TaxId:10090] [49128] (11 PDB entries)
  23. 550408Zinc-alpha-2-glycoprotein, ZAG, alpha-3 domain [48965] (1 species)
    fat depleting factor related to class I MHC

More info for Family b.1.1.2: C1 set domains (antibody constant domain-like)

Timeline for Family b.1.1.2: C1 set domains (antibody constant domain-like):