Lineage for d7c8db_ (7c8d B:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2566909Fold d.318: SARS receptor-binding domain-like [143586] (1 superfamily)
    core: 3 layers, a/b/a; antiparallel beta-sheet of 5 strands, order 13542
  4. 2566910Superfamily d.318.1: SARS receptor-binding domain-like [143587] (1 family) (S)
    automatically mapped to Pfam PF09408
  5. 2566911Family d.318.1.1: SARS receptor-binding domain-like [143588] (1 protein)
    part of PfamB PB000266
  6. 2566912Protein Spike protein S1 [143589] (4 species)
  7. 3082230Species Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049] [382292] (92 PDB entries)
  8. 3089783Domain d7c8db_: 7c8d B: [389845]
    Other proteins in same PDB: d7c8da_
    automated match to d2dd8s1
    complexed with zn

Details for d7c8db_

PDB Entry: 7c8d (more details), 3 Å

PDB Description: cryo-em structure of cat ace2 and sars-cov-2 rbd
PDB Compounds: (B:) Spike protein S1

SCOPe Domain Sequences for d7c8db_:

Sequence; same for both SEQRES and ATOM records: (download)

>d7c8db_ d.318.1.1 (B:) Spike protein S1 {Severe acute respiratory syndrome coronavirus 2 [TaxId: 2697049]}
tnlcpfgevfnatrfasvyawnrkrisncvadysvlynsasfstfkcygvsptklndlcf
tnvyadsfvirgdevrqiapgqtgkiadynyklpddftgcviawnsnnldskvggnynyl
yrlfrksnlkpferdisteiyqagstpcngvegfncyfplqsygfqptngvgyqpyrvvv
lsfellhapatvcgp

SCOPe Domain Coordinates for d7c8db_:

Click to download the PDB-style file with coordinates for d7c8db_.
(The format of our PDB-style files is described here.)

Timeline for d7c8db_:

  • d7c8db_ is new in SCOPe 2.07-stable