Lineage for Species: Echovirus e18 [TaxId: 47506]

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2821496Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2821778Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2821779Family b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [88634] (10 proteins)
    the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2
    there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus)
  6. 2822070Protein automated matches [190854] (27 species)
    not a true protein
  7. 2822125Species Echovirus e18 [TaxId:47506] [366473] (3 PDB entries)

PDB entries in Species: Echovirus e18 [TaxId: 47506]:

  1. Domain(s) for 6hbg:
    1. 2822126Domain d6hbga_: 6hbg A: [369097]
      automated match to d1upna_
      complexed with gun, plm
    2. 2822127Domain d6hbgc_: 6hbg C: [369111]
      automated match to d2x5ic_
      complexed with gun, plm
  2. Domain(s) for 6hbj:
  3. Domain(s) for 7b5f:
    1. 3084312Domain d7b5fa_: 7b5f A: [420629]
      Other proteins in same PDB: d7b5fh_
      automated match to d1upna_
      complexed with gun, plm
    2. 3084335Domain d7b5fc_: 7b5f C: [420652]
      Other proteins in same PDB: d7b5fh_
      automated match to d2x5ic_
      complexed with gun, plm

More info for Species Echovirus e18 [TaxId:47506] from b.121.4.1 automated matches

Timeline for Species Echovirus e18 [TaxId:47506] from b.121.4.1 automated matches: