SCOPe 2.08: Domain d5vxtb1: 5vxt B:1-316

Lineage for d5vxtb1 (5vxt B:1-316)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.3: Prealbumin-like [49451] (8 superfamilies)
   sandwich; 7 strands in 2 sheets, greek-key
   variations: some members have additional 1-2 strands to common fold

4. Superfamily b.3.6: Aromatic compound dioxygenase [49482] (2 families)

5. Family b.3.6.0: automated matches [227249] (1 protein)
   not a true family

6. Protein automated matches [227026] (6 species)
   not a true protein

7. Species Burkholderia ambifaria [TaxId:398577] [335492] (1 PDB entry)

8. Domain d5vxtb1: 5vxt B:1-316 [335499]
   Other proteins in same PDB: d5vxta2, d5vxtb2
   automated match to d1dmha_
   complexed with caq, cl, edo, fe, pty

Details for d5vxtb1

PDB Entry: 5vxt, 1.75 Å

PDB Description: crystal structure of catechol 1,2-dioxygenase from burkholderia ambifaria

PDB Compounds: (B:) catechol 1,2-dioxygenase

SCOPe Domain Sequences for d5vxtb1:

Sequence, based on SEQRES records:

>d5vxtb1 b.3.6.0 (B:1-316) automated matches {Burkholderia ambifaria [TaxId: 398577]}
msvkvfdtkevqdllkaasnagtngangtqagnartqqivhrllgdlfkaiddlditpde
vwagvnylnklgqdgeaallaaglglekyldirmdaedeaigldggtprtiegplyvaga
pvrdgvakidldadegagplvihgtvtgldgkpvagalvecwhanshgfyshfdptgkqs
dfnlrgavktgadgkyefrtlmpvgygcppqgatqqlldrlgrhgnrpahvhffvtsdgh
rklttqfniegdpliwddfayatreelippvtakaggaalglkadayqdiefnfvltprv
egkdnqiverlrasat

Sequence, based on observed residues (ATOM records):

>d5vxtb1 b.3.6.0 (B:1-316) automated matches {Burkholderia ambifaria [TaxId: 398577]}
msvkvfdtkevqdllkaasnagagnartqqivhrllgdlfkaiddlditpdevwagvnyl
nklgqdgeaallaaglglekyldirmdaedeaigldggtprtiegplyvagapvrdgvak
idldadegagplvihgtvtgldgkpvagalvecwhanshgfyshfdptgkqsdfnlrgav
ktgadgkyefrtlmpvgygcppqgatqqlldrlgrhgnrpahvhffvtsdghrklttqfn
iegdpliwddfayatreelippvtakaggaalglkadayqdiefnfvltprvegkdnqiv
erlrasat

Timeline for d5vxtb1:

• d5vxtb1 first appeared in SCOPe 2.06
  
• d5vxtb1 appears in SCOPe 2.07