Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2352458Class b: All beta proteins [48724] (178 folds)
  3. 2423278Fold b.81: Single-stranded left-handed beta-helix [51160] (4 superfamilies)
    superhelix turns are made of parallel beta-strands and (short) turns
  4. 2423279Superfamily b.81.1: Trimeric LpxA-like enzymes [51161] (9 families) (S)
    superhelical turns are made of three short strands; duplication: the sequence hexapeptide repeats correspond to individual strands
  5. 2423339Family b.81.1.3: Galactoside acetyltransferase-like [51168] (4 proteins)
    this is a repeat family; one repeat unit is 1kqa A:80-100 found in domain
  6. 2423406Protein automated matches [190704] (6 species)
    not a true protein

Species:

  1. 2423407Elizabethkingia anophelis [TaxId:1117645] [358347] (1 PDB entry)
  2. 2423409Geobacillus kaustophilus [TaxId:1462] [187850] (1 PDB entry)
  3. 2423413Geobacillus kaustophilus [TaxId:235909] [187975] (1 PDB entry)
  4. 2423420Staphylococcus aureus [TaxId:1280] [193357] (6 PDB entries)
    1. Domains for 4e8l:
      1. 2423427Domain d4e8la_: 4e8l A: [307281]
        automated match to d4husb_
        complexed with cl, mg, so4
      2. 2423428Domain d4e8lb_: 4e8l B: [307282]
        automated match to d4husb_
        complexed with cl, mg, so4
      3. 2423429Domain d4e8lc_: 4e8l C: [307283]
        automated match to d4husb_
        complexed with cl, mg, so4
    2. Domains for 4hur:
      1. 2423421Domain d4hura_: 4hur A: [222748]
        automated match to d4husb_
        complexed with aco, cl, edo, na, so4
      2. 2423422Domain d4hurb_: 4hur B: [222749]
        automated match to d4husb_
        complexed with aco, cl, edo, na, so4
      3. 2423423Domain d4hurc_: 4hur C: [222750]
        automated match to d4husb_
        complexed with aco, cl, edo, na, so4
    3. Domains for 4hus:
      1. 2423424Domain d4husa_: 4hus A: [202475]
        automated match to d4husb_
        complexed with cl, edo, na, peg, pge, so4, vir
      2. 2423425Domain d4husb_: 4hus B: [193358]
        automated match to d1khra_
        complexed with cl, edo, na, peg, pge, so4, vir
      3. 2423426Domain d4husc_: 4hus C: [202476]
        automated match to d4husb_
        complexed with cl, edo, na, peg, pge, so4, vir
    4. Domains for 4myo:
      1. 2423436Domain d4myoa1: 4myo A:7-216 [228418]
        Other proteins in same PDB: d4myoa2, d4myob2
        automated match to d4husb_
        complexed with cl, mg, so4
      2. 2423437Domain d4myob1: 4myo B:7-217 [235703]
        Other proteins in same PDB: d4myoa2, d4myob2
        automated match to d4myoa_
        complexed with cl, mg, so4
      3. 2423438Domain d4myoc_: 4myo C: [235702]
        Other proteins in same PDB: d4myoa2, d4myob2
        automated match to d4myoa_
        complexed with cl, mg, so4
    5. Domains for 6x3c:
      1. 2423439Domain d6x3ca_: 6x3c A: [396252]
        automated match to d4e8la_
        complexed with cl, mg, o7s, po4, so4, sxa
      2. 2423440Domain d6x3cb_: 6x3c B: [396223]
        automated match to d4e8la_
        complexed with cl, mg, o7s, po4, so4, sxa
      3. 2423441Domain d6x3cc_: 6x3c C: [396194]
        automated match to d4e8la_
        complexed with cl, mg, o7s, po4, so4, sxa
      4. 2423442Domain d6x3cd_: 6x3c D: [396203]
        automated match to d4e8la_
        complexed with cl, mg, o7s, po4, so4, sxa
      5. 2423443Domain d6x3ce_: 6x3c E: [396241]
        automated match to d4e8la_
        complexed with cl, mg, o7s, po4, so4, sxa
      6. 2423444Domain d6x3cf_: 6x3c F: [396208]
        automated match to d4e8la_
        complexed with cl, mg, o7s, po4, so4, sxa
    6. Domains for 6x3j:
      1. 2423430Domain d6x3ja_: 6x3j A: [396261]
        automated match to d4husc_
        complexed with cl, mg, o7v, po4, sxa
      2. 2423431Domain d6x3jb_: 6x3j B: [396256]
        automated match to d4husc_
        complexed with cl, mg, o7v, po4, sxa
      3. 2423432Domain d6x3jc_: 6x3j C: [396262]
        automated match to d4husc_
        complexed with cl, mg, o7v, po4, sxa
      4. 2423433Domain d6x3jd_: 6x3j D: [396265]
        automated match to d4husc_
        complexed with cl, mg, o7v, po4, sxa
      5. 2423434Domain d6x3je_: 6x3j E: [396245]
        automated match to d4husc_
        complexed with cl, mg, o7v, po4, sxa
      6. 2423435Domain d6x3jf_: 6x3j F: [396218]
        automated match to d4husc_
        complexed with cl, mg, o7v, po4, sxa
  5. 2423445Vibrio cholerae [TaxId:243277] [188603] (4 PDB entries)
    1. Domains for 3eev:
      1. 2423446Domain d3eeva_: 3eev A: [174903]
        automated match to d1xata_
        complexed with mpd
      2. 2423447Domain d3eevb_: 3eev B: [174904]
        automated match to d1xata_
        complexed with mpd
      3. 2423448Domain d3eevc_: 3eev C: [174905]
        automated match to d1xata_
        complexed with mpd
    2. Domains for 6pua:
      1. 2423449Domain d6puaa1: 6pua A:1-209 [374685]
        Other proteins in same PDB: d6puaa2, d6puab2, d6puac2
        automated match to d3eevc_
        complexed with cl, edo, mpd, po4
      2. 2423450Domain d6puab1: 6pua B:1-209 [374672]
        Other proteins in same PDB: d6puaa2, d6puab2, d6puac2
        automated match to d3eevc_
        complexed with cl, edo, mpd, po4
      3. 2423451Domain d6puac1: 6pua C:1-205 [374696]
        Other proteins in same PDB: d6puaa2, d6puab2, d6puac2
        automated match to d3eevc_
        complexed with cl, edo, mpd, po4
    3. Domain for 6pub:
    4. Domains for 6u9c:
      1. 2423452Domain d6u9ca_: 6u9c A: [374508]
        automated match to d3eevc_
        complexed with aco, cit, cl, ipa, so4
      2. 2423453Domain d6u9cb_: 6u9c B: [374529]
        automated match to d3eevc_
        complexed with aco, cit, cl, ipa, so4
      3. 2423454Domain d6u9cc_: 6u9c C: [374528]
        automated match to d3eevc_
        complexed with aco, cit, cl, ipa, so4
  6. 2423456Vibrio vulnificus [TaxId:216895] [373025] (1 PDB entry)

More info for Protein automated matches from b.81.1.3: Galactoside acetyltransferase-like

Timeline for Protein automated matches from b.81.1.3: Galactoside acetyltransferase-like: