Lineage for Species: Desulfovibrio fructosovorans [TaxId: 878]

  1. Root: SCOPe 2.07
  2. 2618030Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds)
  3. 2624340Fold e.18: HydB/Nqo4-like [56761] (1 superfamily)
    3 domains: (1) all-alpha; (2&3) alpha+beta
  4. 2624341Superfamily e.18.1: HydB/Nqo4-like [56762] (3 families) (S)
  5. 2624342Family e.18.1.1: Nickel-iron hydrogenase, large subunit [56763] (2 proteins)
  6. 2624373Protein automated matches [190109] (8 species)
    not a true protein
  7. 2624414Species Desulfovibrio fructosovorans [TaxId:878] [188150] (12 PDB entries)

PDB entries in Species: Desulfovibrio fructosovorans [TaxId: 878]:

  1. Domain(s) for 1yqw:
    1. 2624433Domain d1yqwq_: 1yqw Q: [162282]
      Other proteins in same PDB: d1yqwa_, d1yqwb_, d1yqwc_
      automated match to d1e3db_
      complexed with bct, f3s, fco, fe2, gol, mg, ni, per, sf4
    2. 2624434Domain d1yqwr_: 1yqw R: [162283]
      Other proteins in same PDB: d1yqwa_, d1yqwb_, d1yqwc_
      automated match to d1e3db_
      complexed with bct, f3s, fco, fe2, gol, mg, ni, per, sf4
    3. 2624435Domain d1yqws_: 1yqw S: [162284]
      Other proteins in same PDB: d1yqwa_, d1yqwb_, d1yqwc_
      automated match to d1e3db_
      complexed with bct, f3s, fco, fe2, gol, mg, ni, per, sf4
  2. Domain(s) for 1yrq:
    1. 2624442Domain d1yrqh_: 1yrq H: [162292]
      Other proteins in same PDB: d1yrqa_, d1yrqb_, d1yrqc_, d1yrqd_, d1yrqf_, d1yrqg_
      automated match to d1e3db_
      complexed with f3s, fco, mg, ni, sf4
    2. 2624443Domain d1yrqi_: 1yrq I: [162293]
      Other proteins in same PDB: d1yrqa_, d1yrqb_, d1yrqc_, d1yrqd_, d1yrqf_, d1yrqg_
      automated match to d1e3db_
      complexed with f3s, fco, mg, ni, sf4
    3. 2624444Domain d1yrqj_: 1yrq J: [162294]
      Other proteins in same PDB: d1yrqa_, d1yrqb_, d1yrqc_, d1yrqd_, d1yrqf_, d1yrqg_
      automated match to d1e3db_
      complexed with f3s, fco, mg, ni, sf4
    4. 2624445Domain d1yrqk_: 1yrq K: [162295]
      Other proteins in same PDB: d1yrqa_, d1yrqb_, d1yrqc_, d1yrqd_, d1yrqf_, d1yrqg_
      automated match to d1e3db_
      complexed with f3s, fco, mg, ni, sf4
    5. 2624446Domain d1yrqm_: 1yrq M: [162296]
      Other proteins in same PDB: d1yrqa_, d1yrqb_, d1yrqc_, d1yrqd_, d1yrqf_, d1yrqg_
      automated match to d1e3db_
      complexed with f3s, fco, mg, ni, sf4
    6. 2624447Domain d1yrqn_: 1yrq N: [162297]
      Other proteins in same PDB: d1yrqa_, d1yrqb_, d1yrqc_, d1yrqd_, d1yrqf_, d1yrqg_
      automated match to d1e3db_
      complexed with f3s, fco, mg, ni, sf4
  3. Domain(s) for 3cur:
    1. 2624427Domain d3curh_: 3cur H: [173475]
      Other proteins in same PDB: d3cura_, d3curb_, d3curc_
      automated match to d1e3db_
      complexed with f3s, fco, gol, mg, ni, per, sf4; mutant
    2. 2624428Domain d3curi_: 3cur I: [173476]
      Other proteins in same PDB: d3cura_, d3curb_, d3curc_
      automated match to d1e3db_
      complexed with f3s, fco, gol, mg, ni, per, sf4; mutant
    3. 2624429Domain d3curj_: 3cur J: [173477]
      Other proteins in same PDB: d3cura_, d3curb_, d3curc_
      automated match to d1e3db_
      complexed with f3s, fco, gol, mg, ni, per, sf4; mutant
  4. Domain(s) for 3cus:
    1. 2624430Domain d3cusq_: 3cus Q: [173481]
      Other proteins in same PDB: d3cusa_, d3cusb_, d3cusc_
      automated match to d1e3db_
      complexed with f3s, fco, gol, mg, ni, sf4; mutant
    2. 2624431Domain d3cusr_: 3cus R: [173482]
      Other proteins in same PDB: d3cusa_, d3cusb_, d3cusc_
      automated match to d1e3db_
      complexed with f3s, fco, gol, mg, ni, sf4; mutant
    3. 2624432Domain d3cuss_: 3cus S: [173483]
      Other proteins in same PDB: d3cusa_, d3cusb_, d3cusc_
      automated match to d1e3db_
      complexed with f3s, fco, gol, mg, ni, sf4; mutant
  5. Domain(s) for 3h3x:
    1. 2624439Domain d3h3xq_: 3h3x Q: [177172]
      Other proteins in same PDB: d3h3xa_, d3h3xb_, d3h3xc_
      automated match to d1e3db_
      complexed with f3s, fco, gol, mg, ni, sf4; mutant
    2. 2624440Domain d3h3xr_: 3h3x R: [177173]
      Other proteins in same PDB: d3h3xa_, d3h3xb_, d3h3xc_
      automated match to d1e3db_
      complexed with f3s, fco, gol, mg, ni, sf4; mutant
    3. 2624441Domain d3h3xs_: 3h3x S: [177174]
      Other proteins in same PDB: d3h3xa_, d3h3xb_, d3h3xc_
      automated match to d1e3db_
      complexed with f3s, fco, gol, mg, ni, sf4; mutant
  6. Domain(s) for 4ue2:
    1. 2624436Domain d4ue2q_: 4ue2 Q: [270682]
      Other proteins in same PDB: d4ue2a_, d4ue2b_, d4ue2c_
      automated match to d1yrqh_
      complexed with f3s, fco, gol, mg, ni, sf4
    2. 2624437Domain d4ue2r_: 4ue2 R: [270686]
      Other proteins in same PDB: d4ue2a_, d4ue2b_, d4ue2c_
      automated match to d1yrqh_
      complexed with f3s, fco, gol, mg, ni, sf4
    3. 2624438Domain d4ue2s_: 4ue2 S: [270684]
      Other proteins in same PDB: d4ue2a_, d4ue2b_, d4ue2c_
      automated match to d1yrqh_
      complexed with f3s, fco, gol, mg, ni, sf4
  7. Domain(s) for 4ue6:
    1. 2624448Domain d4ue6q_: 4ue6 Q: [270676]
      Other proteins in same PDB: d4ue6a_, d4ue6b_, d4ue6c_
      automated match to d1yrqh_
      complexed with f3s, fco, gol, mg, ni, sf4
    2. 2624449Domain d4ue6r_: 4ue6 R: [270679]
      Other proteins in same PDB: d4ue6a_, d4ue6b_, d4ue6c_
      automated match to d1yrqh_
      complexed with f3s, fco, gol, mg, ni, sf4
    3. 2624450Domain d4ue6s_: 4ue6 S: [270681]
      Other proteins in same PDB: d4ue6a_, d4ue6b_, d4ue6c_
      automated match to d1yrqh_
      complexed with f3s, fco, gol, mg, ni, sf4
  8. Domain(s) for 4upe:
    1. 2624424Domain d4upeq_: 4upe Q: [260828]
      Other proteins in same PDB: d4upea_, d4upeb_, d4upec_
      automated match to d1yrqh_
      complexed with ca, f3s, fco, gol, mes, ni, po4, sf4; mutant
    2. 2624425Domain d4uper_: 4upe R: [263989]
      Other proteins in same PDB: d4upea_, d4upeb_, d4upec_
      automated match to d1yrqh_
      complexed with ca, f3s, fco, gol, mes, ni, po4, sf4; mutant
    3. 2624426Domain d4upes_: 4upe S: [263990]
      Other proteins in same PDB: d4upea_, d4upeb_, d4upec_
      automated match to d1yrqh_
      complexed with ca, f3s, fco, gol, mes, ni, po4, sf4; mutant
  9. Domain(s) for 4upv:
    1. 2624422Domain d4upvq_: 4upv Q: [260829]
      Other proteins in same PDB: d4upva_, d4upvb_
      automated match to d1yrqh_
      complexed with cl, f3s, fco, gly, gol, h2s, mg, ni, sf4, sot; mutant
    2. 2624423Domain d4upvr_: 4upv R: [263995]
      Other proteins in same PDB: d4upva_, d4upvb_
      automated match to d1yrqh_
      complexed with cl, f3s, fco, gly, gol, h2s, mg, ni, sf4, sot; mutant
  10. Domain(s) for 4uql:
    1. 2624415Domain d4uqlq_: 4uql Q: [267473]
      Other proteins in same PDB: d4uqla_, d4uqlb_
      automated match to d1yrqh_
      complexed with cl, f3s, fco, gly, gol, h2s, mg, ni, sf4, sot; mutant
    2. 2624416Domain d4uqlr_: 4uql R: [267474]
      Other proteins in same PDB: d4uqla_, d4uqlb_
      automated match to d1yrqh_
      complexed with cl, f3s, fco, gly, gol, h2s, mg, ni, sf4, sot; mutant
  11. Domain(s) for 4uqp:
    1. 2624417Domain d4uqpq_: 4uqp Q: [267477]
      Other proteins in same PDB: d4uqpa_, d4uqpb_
      automated match to d1yrqh_
      complexed with f3s, fco, gly, gol, h2s, mg, ni, sf4, sot; mutant
    2. 2624418Domain d4uqpr_: 4uqp R: [267478]
      Other proteins in same PDB: d4uqpa_, d4uqpb_
      automated match to d1yrqh_
      complexed with f3s, fco, gly, gol, h2s, mg, ni, sf4, sot; mutant
  12. Domain(s) for 4urh:
    1. 2624419Domain d4urhq_: 4urh Q: [260835]
      Other proteins in same PDB: d4urha_, d4urhb_, d4urhc_
      automated match to d1yrqh_
      complexed with f3s, fco, gol, mg, ni, sf4
    2. 2624420Domain d4urhr_: 4urh R: [260834]
      Other proteins in same PDB: d4urha_, d4urhb_, d4urhc_
      automated match to d1yrqh_
      complexed with f3s, fco, gol, mg, ni, sf4
    3. 2624421Domain d4urhs_: 4urh S: [263999]
      Other proteins in same PDB: d4urha_, d4urhb_, d4urhc_
      automated match to d1yrqh_
      complexed with f3s, fco, gol, mg, ni, sf4

More info for Species Desulfovibrio fructosovorans [TaxId:878] from e.18.1.1 automated matches

Timeline for Species Desulfovibrio fructosovorans [TaxId:878] from e.18.1.1 automated matches: