Lineage for d1k6yd1 (1k6y D:1-46)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1981147Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. 1984450Superfamily a.4.10: N-terminal Zn binding domain of HIV integrase [46919] (1 family) (S)
  5. 1984451Family a.4.10.1: N-terminal Zn binding domain of HIV integrase [46920] (1 protein)
    Zn-binding site is near the C-terminus
  6. 1984452Protein N-terminal Zn binding domain of HIV integrase [46921] (2 species)
  7. 1984453Species Human immunodeficiency virus type 1 [TaxId:11676] [46922] (7 PDB entries)
  8. 1984457Domain d1k6yd1: 1k6y D:1-46 [68245]
    Other proteins in same PDB: d1k6ya2, d1k6yb2, d1k6yc2, d1k6yd2
    complexed with k, po4, zn

Details for d1k6yd1

PDB Entry: 1k6y (more details), 2.4 Å

PDB Description: Crystal Structure of a Two-Domain Fragment of HIV-1 Integrase
PDB Compounds: (D:) integrase

SCOPe Domain Sequences for d1k6yd1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1k6yd1 a.4.10.1 (D:1-46) N-terminal Zn binding domain of HIV integrase {Human immunodeficiency virus type 1 [TaxId: 11676]}
fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlk

SCOPe Domain Coordinates for d1k6yd1:

Click to download the PDB-style file with coordinates for d1k6yd1.
(The format of our PDB-style files is described here.)

Timeline for d1k6yd1: