SCOPe 2.07: Protein: Cre recombinase

Lineage for Protein: Cre recombinase

Root: SCOPe 2.07
Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
Fold d.163: DNA breaking-rejoining enzymes [56348] (1 superfamily)
core: alpha3-beta3-alpha4; one side of beta-sheet is exposed
Superfamily d.163.1: DNA breaking-rejoining enzymes [56349] (2 families)
Family d.163.1.1: Lambda integrase-like, catalytic core [56350] (6 proteins)
Protein Cre recombinase [56355] (1 species)

Species:

Bacteriophage P1 [TaxId:10678] [56356] (20 PDB entries)
Uniprot P06956 20-341
1. Domains for 1crx:
  1. Domain d1crxa2: 1crx A:130-341 [42157]
    Other proteins in same PDB: d1crxa1, d1crxb1
    protein/DNA complex; complexed with po4
  2. Domain d1crxb2: 1crx B:130-341 [42158]
    Other proteins in same PDB: d1crxa1, d1crxb1
    protein/DNA complex; complexed with po4
2. Domain for 1drg:
  - Domain d1drga2: 1drg A:130-343 [64793]
    Other proteins in same PDB: d1drga1
    protein/DNA complex
3. Domain for 1f44:
  - Domain d1f44a2: 1f44 A:130-343 [64983]
    Other proteins in same PDB: d1f44a1
    protein/DNA complex
4. Domains for 1kbu:
  1. Domain d1kbua2: 1kbu A:130-341 [72285]
    Other proteins in same PDB: d1kbua1, d1kbub1
    protein/DNA complex
  2. Domain d1kbub2: 1kbu B:130-341 [72287]
    Other proteins in same PDB: d1kbua1, d1kbub1
    protein/DNA complex
5. Domains for 1ma7:
  1. Domain d1ma7a2: 1ma7 A:130-341 [84922]
    Other proteins in same PDB: d1ma7a1, d1ma7b1
    protein/DNA complex; mutant
  2. Domain d1ma7b2: 1ma7 B:130-341 [84924]
    Other proteins in same PDB: d1ma7a1, d1ma7b1
    protein/DNA complex; mutant
6. Domains for 1nzb:
  1. Domain d1nzba2: 1nzb A:130-341 [92366]
    Other proteins in same PDB: d1nzba1, d1nzbb1, d1nzbe1, d1nzbf1
    protein/DNA complex; complexed with iod, mg
  2. Domain d1nzbb2: 1nzb B:130-341 [92368]
    Other proteins in same PDB: d1nzba1, d1nzbb1, d1nzbe1, d1nzbf1
    protein/DNA complex; complexed with iod, mg
  3. Domain d1nzbe2: 1nzb E:130-341 [92370]
    Other proteins in same PDB: d1nzba1, d1nzbb1, d1nzbe1, d1nzbf1
    protein/DNA complex; complexed with iod, mg
  4. Domain d1nzbf2: 1nzb F:130-341 [92372]
    Other proteins in same PDB: d1nzba1, d1nzbb1, d1nzbe1, d1nzbf1
    protein/DNA complex; complexed with iod, mg
7. Domains for 1ouq:
  1. Domain d1ouqa2: 1ouq A:130-341 [93558]
    Other proteins in same PDB: d1ouqa1, d1ouqb1, d1ouqe1, d1ouqf1
    protein/DNA complex; complexed with iod, mg
  2. Domain d1ouqb2: 1ouq B:130-341 [93560]
    Other proteins in same PDB: d1ouqa1, d1ouqb1, d1ouqe1, d1ouqf1
    protein/DNA complex; complexed with iod, mg
  3. Domain d1ouqe2: 1ouq E:130-341 [93562]
    Other proteins in same PDB: d1ouqa1, d1ouqb1, d1ouqe1, d1ouqf1
    protein/DNA complex; complexed with iod, mg
  4. Domain d1ouqf2: 1ouq F:130-341 [93564]
    Other proteins in same PDB: d1ouqa1, d1ouqb1, d1ouqe1, d1ouqf1
    protein/DNA complex; complexed with iod, mg
8. Domains for 1pvp:
  1. Domain d1pvpa2: 1pvp A:130-341 [95178]
    Other proteins in same PDB: d1pvpa1, d1pvpb1
    protein/DNA complex
  2. Domain d1pvpb2: 1pvp B:130-341 [95180]
    Other proteins in same PDB: d1pvpa1, d1pvpb1
    protein/DNA complex
9. Domains for 1pvq:
  1. Domain d1pvqa2: 1pvq A:130-341 [95182]
    Other proteins in same PDB: d1pvqa1, d1pvqb1
    protein/DNA complex
  2. Domain d1pvqb2: 1pvq B:130-341 [95184]
    Other proteins in same PDB: d1pvqa1, d1pvqb1
    protein/DNA complex
10. Domains for 1pvr:
  1. Domain d1pvra2: 1pvr A:130-341 [95186]
    Other proteins in same PDB: d1pvra1, d1pvrb1
    protein/DNA complex
  2. Domain d1pvrb2: 1pvr B:130-341 [95188]
    Other proteins in same PDB: d1pvra1, d1pvrb1
    protein/DNA complex
11. Domains for 1q3u:
  1. Domain d1q3ua2: 1q3u A:130-341 [95753]
    Other proteins in same PDB: d1q3ua1, d1q3ub1, d1q3ue1, d1q3uf1
    protein/DNA complex; complexed with iod, mg
  2. Domain d1q3ub2: 1q3u B:130-341 [95755]
    Other proteins in same PDB: d1q3ua1, d1q3ub1, d1q3ue1, d1q3uf1
    protein/DNA complex; complexed with iod, mg
  3. Domain d1q3ue2: 1q3u E:130-341 [95757]
    Other proteins in same PDB: d1q3ua1, d1q3ub1, d1q3ue1, d1q3uf1
    protein/DNA complex; complexed with iod, mg
  4. Domain d1q3uf2: 1q3u F:130-341 [95759]
    Other proteins in same PDB: d1q3ua1, d1q3ub1, d1q3ue1, d1q3uf1
    protein/DNA complex; complexed with iod, mg
12. Domains for 1q3v:
  1. Domain d1q3va2: 1q3v A:130-341 [95761]
    Other proteins in same PDB: d1q3va1, d1q3vb1, d1q3ve1, d1q3vf1
    protein/DNA complex; complexed with iod, mg
  2. Domain d1q3vb2: 1q3v B:130-341 [95763]
    Other proteins in same PDB: d1q3va1, d1q3vb1, d1q3ve1, d1q3vf1
    protein/DNA complex; complexed with iod, mg
  3. Domain d1q3ve2: 1q3v E:130-341 [95765]
    Other proteins in same PDB: d1q3va1, d1q3vb1, d1q3ve1, d1q3vf1
    protein/DNA complex; complexed with iod, mg
  4. Domain d1q3vf2: 1q3v F:130-341 [95767]
    Other proteins in same PDB: d1q3va1, d1q3vb1, d1q3ve1, d1q3vf1
    protein/DNA complex; complexed with iod, mg
13. Domains for 1xns:
  1. Domain d1xnsa2: 1xns A:130-341 [115648]
    Other proteins in same PDB: d1xnsa1, d1xnsb1
    protein/DNA complex
  2. Domain d1xnsb2: 1xns B:130-341 [115650]
    Other proteins in same PDB: d1xnsa1, d1xnsb1
    protein/DNA complex
14. Domains for 1xo0:
  1. Domain d1xo0a2: 1xo0 A:130-341 [115675]
    Other proteins in same PDB: d1xo0a1, d1xo0b1
    protein/DNA complex
  2. Domain d1xo0b2: 1xo0 B:130-341 [115677]
    Other proteins in same PDB: d1xo0a1, d1xo0b1
    protein/DNA complex
15. Domains for 2crx:
  1. Domain d2crxa2: 2crx A:130-341 [42159]
    Other proteins in same PDB: d2crxa1, d2crxb1
    protein/DNA complex
  2. Domain d2crxb2: 2crx B:130-341 [42160]
    Other proteins in same PDB: d2crxa1, d2crxb1
    protein/DNA complex
16. Domains for 2hof:
  1. Domain d2hofa2: 2hof A:130-341 [147314]
    Other proteins in same PDB: d2hofa1, d2hofb1
    automated match to d1f44a2
    protein/DNA complex
  2. Domain d2hofb2: 2hof B:130-341 [147316]
    Other proteins in same PDB: d2hofa1, d2hofb1
    automated match to d1f44a2
    protein/DNA complex
17. Domains for 3crx:
  1. Domain d3crxa2: 3crx A:130-341 [42161]
    Other proteins in same PDB: d3crxa1, d3crxb1
    protein/DNA complex
  2. Domain d3crxb2: 3crx B:130-341 [42162]
    Other proteins in same PDB: d3crxa1, d3crxb1
    protein/DNA complex
18. Domains for 3mgv:
  1. Domain d3mgva2: 3mgv A:130-341 [213254]
    Other proteins in same PDB: d3mgva1, d3mgvb1, d3mgvc1, d3mgvd1
    automated match to d2crxa2
    protein/DNA complex; complexed with vo4
  2. Domain d3mgvb2: 3mgv B:130-341 [213256]
    Other proteins in same PDB: d3mgva1, d3mgvb1, d3mgvc1, d3mgvd1
    automated match to d2crxa2
    protein/DNA complex; complexed with vo4
  3. Domain d3mgvc2: 3mgv C:130-341 [213258]
    Other proteins in same PDB: d3mgva1, d3mgvb1, d3mgvc1, d3mgvd1
    automated match to d2crxa2
    protein/DNA complex; complexed with vo4
  4. Domain d3mgvd2: 3mgv D:130-341 [213260]
    Other proteins in same PDB: d3mgva1, d3mgvb1, d3mgvc1, d3mgvd1
    automated match to d2crxa2
    protein/DNA complex; complexed with vo4
19. Domains for 4crx:
  1. Domain d4crxa2: 4crx A:130-341 [42155]
    Other proteins in same PDB: d4crxa1, d4crxb1
    protein/DNA complex
  2. Domain d4crxb2: 4crx B:130-341 [42156]
    Other proteins in same PDB: d4crxa1, d4crxb1
    protein/DNA complex
20. Domains for 5crx:
  1. Domain d5crxa2: 5crx A:130-340 [42163]
    Other proteins in same PDB: d5crxa1, d5crxb1
  2. Domain d5crxb2: 5crx B:130-314 [42164]
    Other proteins in same PDB: d5crxa1, d5crxb1

More info for Protein Cre recombinase from d.163.1.1: Lambda integrase-like, catalytic core

Timeline for Protein Cre recombinase from d.163.1.1: Lambda integrase-like, catalytic core:

Protein Cre recombinase from d.163.1.1: Lambda integrase-like, catalytic core first appeared (with stable ids) in SCOP 1.55
Protein Cre recombinase from d.163.1.1: Lambda integrase-like, catalytic core appears in SCOPe 2.06
Protein Cre recombinase from d.163.1.1: Lambda integrase-like, catalytic core appears in the current release, SCOPe 2.08