SCOPe 2.08: Species: Thermococcus litoralis [TaxId: 2265]

Lineage for Species: Thermococcus litoralis [TaxId: 2265]

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
The nucleotide-binding modes of this and the next two folds/superfamilies are similar

Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

Family c.2.1.7: Aminoacid dehydrogenase-like, C-terminal domain [51883] (12 proteins)
extra N-terminal helix displaces the C-terminal helix (following strand 6) from its usual position creating a family nicotineamide-binding site

Protein Glutamate dehydrogenase [51884] (8 species)
Species Thermococcus litoralis [TaxId:2265] [51887] (1 PDB entry)

PDB entry in Species: Thermococcus litoralis [TaxId: 2265]:

Domain(s) for 1bvu:
1. Domain d1bvua1: 1bvu A:181-418 [30226]
  Other proteins in same PDB: d1bvua2, d1bvub2, d1bvuc2, d1bvud2, d1bvue2, d1bvuf2
  has additional insertions and/or extensions that are not grouped together
2. Domain d1bvub1: 1bvu B:181-418 [30227]
  Other proteins in same PDB: d1bvua2, d1bvub2, d1bvuc2, d1bvud2, d1bvue2, d1bvuf2
  has additional insertions and/or extensions that are not grouped together
3. Domain d1bvuc1: 1bvu C:181-418 [30228]
  Other proteins in same PDB: d1bvua2, d1bvub2, d1bvuc2, d1bvud2, d1bvue2, d1bvuf2
  has additional insertions and/or extensions that are not grouped together
4. Domain d1bvud1: 1bvu D:181-418 [30229]
  Other proteins in same PDB: d1bvua2, d1bvub2, d1bvuc2, d1bvud2, d1bvue2, d1bvuf2
  has additional insertions and/or extensions that are not grouped together
5. Domain d1bvue1: 1bvu E:181-418 [30230]
  Other proteins in same PDB: d1bvua2, d1bvub2, d1bvuc2, d1bvud2, d1bvue2, d1bvuf2
  has additional insertions and/or extensions that are not grouped together
6. Domain d1bvuf1: 1bvu F:181-418 [30231]
  Other proteins in same PDB: d1bvua2, d1bvub2, d1bvuc2, d1bvud2, d1bvue2, d1bvuf2
  has additional insertions and/or extensions that are not grouped together

More info for Species Thermococcus litoralis [TaxId:2265] from c.2.1.7 Glutamate dehydrogenase

Timeline for Species Thermococcus litoralis [TaxId:2265] from c.2.1.7 Glutamate dehydrogenase:

Species Thermococcus litoralis [TaxId:2265] from c.2.1.7 Glutamate dehydrogenase first appeared (with stable ids) in SCOP 1.55
Species Thermococcus litoralis [TaxId:2265] from c.2.1.7 Glutamate dehydrogenase appears in SCOPe 2.07