SCOP 1.73: Protein: Simian immunodeficiency virus (SIV) protease

Lineage for Protein: Simian immunodeficiency virus (SIV) protease

Root: SCOP 1.73
Class b: All beta proteins [48724] (165 folds)
Fold b.50: Acid proteases [50629] (1 superfamily)
barrel, closed; n=6, S=10, complex topology
Superfamily b.50.1: Acid proteases [50630] (2 families)
Family b.50.1.1: Retroviral protease (retropepsin) [50631] (8 proteins)
dimer of identical mono-domain chains, each containing (6,10) barrel
Protein Simian immunodeficiency virus (SIV) protease [50636] (1 species)

Species:

Simian immunodeficiency virus, different strains [TaxId:11723] [50637] (16 PDB entries)
1. Domain for 1az5:
  - Domain d1az5a_: 1az5 A: [26747]
    mutant
2. Domains for 1k6c:
  1. Domain d1k6ca_: 1k6c A: [68215]
  2. Domain d1k6cb_: 1k6c B: [68216]
    complexed with act, mk1; mutant
3. Domains for 1k6p:
  1. Domain d1k6pa_: 1k6p A: [68229]
  2. Domain d1k6pb_: 1k6p B: [68230]
    complexed with act, xn3; mutant
4. Domains for 1k6t:
  1. Domain d1k6ta_: 1k6t A: [68231]
  2. Domain d1k6tb_: 1k6t B: [68232]
    complexed with act, xn1; mutant
5. Domains for 1k6v:
  1. Domain d1k6va_: 1k6v A: [68234]
  2. Domain d1k6vb_: 1k6v B: [68235]
    complexed with act, xn2; mutant
6. Domain for 1sip:
  - Domain d1sipa_: 1sip A: [26757]
7. Domains for 1siv:
  1. Domain d1siva_: 1siv A: [26758]
  2. Domain d1sivb_: 1siv B: [26759]
    complexed with gli
8. Domains for 1t7i:
  1. Domain d1t7ia1: 1t7i A:1-99 [119166]
    automatically matched to d1k6ca_
    complexed with 017, act, po4; mutant
  2. Domain d1t7ib1: 1t7i B:1-99 [119167]
    automatically matched to d1k6ca_
    complexed with 017, act, po4; mutant
9. Domains for 1t7j:
  1. Domain d1t7ja1: 1t7j A:1-99 [119168]
    automatically matched to d1k6ca_
    complexed with 478, act; mutant
  2. Domain d1t7jb1: 1t7j B:1-99 [119169]
    automatically matched to d1k6ca_
    complexed with 478, act; mutant
10. Domains for 1tcw:
  1. Domain d1tcwa_: 1tcw A: [26760]
  2. Domain d1tcwb_: 1tcw B: [26761]
    complexed with im1
11. Domains for 1tcx:
  1. Domain d1tcxa_: 1tcx A: [26748]
  2. Domain d1tcxb_: 1tcx B: [26749]
    complexed with im1; mutant
12. Domains for 1ytg:
  1. Domain d1ytga_: 1ytg A: [26750]
  2. Domain d1ytgb_: 1ytg B: [26751]
    complexed with nh2; mutant
13. Domains for 1yth:
  1. Domain d1ytha_: 1yth A: [26752]
  2. Domain d1ythb_: 1yth B: [26753]
    complexed with ace; mutant
14. Domain for 1yti:
  - Domain d1ytia_: 1yti A: [26754]
    mutant
15. Domain for 1ytj:
  - Domain d1ytja_: 1ytj A: [26756]
    complexed with ppn; mutant
16. Domain for 2sam:
  - Domain d2sama_: 2sam A: [26755]
    complexed with epn; mutant

More info for Protein Simian immunodeficiency virus (SIV) protease from b.50.1.1: Retroviral protease (retropepsin)

Timeline for Protein Simian immunodeficiency virus (SIV) protease from b.50.1.1: Retroviral protease (retropepsin):

Protein Simian immunodeficiency virus (SIV) protease from b.50.1.1: Retroviral protease (retropepsin) first appeared (with stable ids) in SCOP 1.55
Protein Simian immunodeficiency virus (SIV) protease from b.50.1.1: Retroviral protease (retropepsin) appears in SCOP 1.71
Protein Simian immunodeficiency virus (SIV) protease from b.50.1.1: Retroviral protease (retropepsin) appears in SCOP 1.75
Protein Simian immunodeficiency virus (SIV) protease from b.50.1.1: Retroviral protease (retropepsin) appears in the current release, SCOPe 2.08