SCOP 1.65: Protein: c-Myb, DNA-binding domain

Lineage for Protein: c-Myb, DNA-binding domain

Root: SCOP 1.65
Class a: All alpha proteins [46456] (179 folds)
Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (12 superfamilies)
core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
Superfamily a.4.1: Homeodomain-like [46689] (11 families)
consists only of helices
Family a.4.1.3: Myb [46739] (4 proteins)
Protein c-Myb, DNA-binding domain [46740] (1 species)
duplication

Species:

Mouse (Mus musculus) [TaxId:10090] [46742] (16 PDB entries)
1. Domain for 1guu:
  - Domain d1guua_: 1guu A: [83332]
    repeat 1
    complexed with na
2. Domains for 1gv2:
  1. Domain d1gv2a1: 1gv2 A:89-143 [83335]
  2. Domain d1gv2a2: 1gv2 A:144-190 [83336]
    repeats 2 & 3
    complexed with na
3. Domain for 1gv5:
  - Domain d1gv5a_: 1gv5 A: [83337]
    repeat 2
    complexed with na
4. Domain for 1gvd:
  - Domain d1gvda_: 1gvd A: [83338]
    repeat 2
    complexed with nh4, so4; mutant
5. Domains for 1h88:
  1. Domain d1h88c1: 1h88 C:39-88 [65721]
    Other proteins in same PDB: d1h88a_, d1h88b_
  2. Domain d1h88c2: 1h88 C:89-143 [65722]
    Other proteins in same PDB: d1h88a_, d1h88b_
  3. Domain d1h88c3: 1h88 C:144-190 [65723]
    Other proteins in same PDB: d1h88a_, d1h88b_
    complexed with nh4; mutant
6. Domains for 1h89:
  1. Domain d1h89c1: 1h89 C:77-88 [65726]
    Other proteins in same PDB: d1h89a_, d1h89b_
  2. Domain d1h89c2: 1h89 C:89-143 [65727]
    Other proteins in same PDB: d1h89a_, d1h89b_
  3. Domain d1h89c3: 1h89 C:144-191 [65728]
    Other proteins in same PDB: d1h89a_, d1h89b_
    repeat 1 is partly disordered
    complexed with k; mutant
7. Domain for 1idy:
  - Domain d1idy__: 1idy - [16034]
    repeat 3
    mutant
8. Domain for 1idz:
  - Domain d1idz__: 1idz - [16032]
    repeat 3
    mutant
9. Domain for 1mbe:
  - Domain d1mbe__: 1mbe - [16038]
    repeat 1
    complexed with nh2
10. Domain for 1mbf:
  - Domain d1mbf__: 1mbf - [16037]
    repeat 1
    complexed with nh2
11. Domain for 1mbg:
  - Domain d1mbg__: 1mbg - [16033]
    repeat 2
    complexed with nh2
12. Domain for 1mbh:
  - Domain d1mbh__: 1mbh - [16036]
    repeat 2
    complexed with nh2
13. Domain for 1mbj:
  - Domain d1mbj__: 1mbj - [16035]
    repeat 3
    complexed with nh2
14. Domain for 1mbk:
  - Domain d1mbk__: 1mbk - [16031]
    repeat 3
    complexed with nh2
15. Domains for 1mse:
  1. Domain d1msec1: 1mse C:89-143 [16039]
  2. Domain d1msec2: 1mse C:144-193 [16040]
    repeats 2 & 3
    protein/DNA complex
16. Domains for 1msf:
  1. Domain d1msfc1: 1msf C:89-143 [16041]
  2. Domain d1msfc2: 1msf C:144-193 [16042]
    repeats 2 & 3
    protein/DNA complex

More info for Protein c-Myb, DNA-binding domain from a.4.1.3: Myb

Timeline for Protein c-Myb, DNA-binding domain from a.4.1.3: Myb:

Protein c-Myb, DNA-binding domain from a.4.1.3: Myb first appeared (with stable ids) in SCOP 1.55
Protein c-Myb, DNA-binding domain from a.4.1.3: Myb appears in SCOP 1.63
Protein c-Myb, DNA-binding domain from a.4.1.3: Myb is called Protein c-Myb, DNA-binding domain from a.4.1.3: Myb/SANT domain in SCOP 1.67
Protein c-Myb, DNA-binding domain from a.4.1.3: Myb appears in the current release, SCOPe 2.08, called Protein c-Myb, DNA-binding domain from a.4.1.3: Myb/SANT domain