Lineage for d6ml1a_ (6ml1 A:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2497139Fold d.3: Cysteine proteinases [54000] (1 superfamily)
    consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
  4. 2497140Superfamily d.3.1: Cysteine proteinases [54001] (24 families) (S)
    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
  5. 2498051Family d.3.1.0: automated matches [191342] (1 protein)
    not a true family
  6. 2498052Protein automated matches [190230] (21 species)
    not a true protein
  7. 2498073Species Human (Homo sapiens) [TaxId:9606] [187072] (48 PDB entries)
  8. 3062959Domain d6ml1a_: 6ml1 A: [363021]
    Other proteins in same PDB: d6ml1c1, d6ml1c2, d6ml1e1, d6ml1e2
    automated match to d3nhea_
    complexed with ca, cl, edo, mes, na, zn

Details for d6ml1a_

PDB Entry: 6ml1 (more details), 1.9 Å

PDB Description: structure of the usp15 deubiquitinase domain in complex with an affinity-matured inhibitory ubv
PDB Compounds: (A:) Ubiquitin carboxyl-terminal hydrolase 15,Ubiquitin carboxyl-terminal hydrolase 15,Ubiquitin carboxyl-terminal hydrolase 15

SCOPe Domain Sequences for d6ml1a_:

Sequence, based on SEQRES records: (download)

>d6ml1a_ d.3.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
neqpglcglsnlgntcfmnsaiqclsntpplteyflndkyqeelnfdnplgmrgeiaksy
aelikqmwsgkfsyvtprafktqvgrfapqfsgyqqqdcqellaflldglhedlnrirkk
pyiqlkdadgrpdkvvaeeawenhlkrndsiivdifhglfkstlvcpecakisvtfdpfc
yltlplpmpkkpfvklkdcielfttkeklgaedpwycpnckehqqatkkldlwslppvlv
vhlkrfsysrymrdkldtlvdfpindldmsgcrynliavsnhyggmggghytafaknkdd
gkwyyfddssvstasedqivskaayvlfyqrq

Sequence, based on observed residues (ATOM records): (download)

>d6ml1a_ d.3.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
neqpglcglsnlgfmnsaiqclsntpplteyflndkyqeelnfdnplgmrgeiaksyael
ikqmwsgkfsyvtprafktqvgrfapqfcqellaflldglhedlnrirkkpyiqlkdadg
rpdkvvaeeawenhlkrndsiivdifhglfkstlvcpecakisvtfdpfcyltlplpmpk
kpfvklkdcielfttkeklgdpwycpnckehqqatkkldlwslppvlvvhlkrfsysrym
rdkldtlvdfpindldmsgcrynliavsnhygghytafaknkddgkwyyfddssvstase
dqivskaayvlfyqrq

SCOPe Domain Coordinates for d6ml1a_:

Click to download the PDB-style file with coordinates for d6ml1a_.
(The format of our PDB-style files is described here.)

Timeline for d6ml1a_:

  • d6ml1a_ appears in periodic updates to SCOPe 2.07 starting on 2019-01-24