Lineage for d5b61d_ (5b61 D:)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2939772Fold d.22: GFP-like [54510] (1 superfamily)
    beta-sheet folds into a barrel (n=11, S=14) around the central helix
  4. 2939773Superfamily d.22.1: GFP-like [54511] (3 families) (S)
  5. 2939774Family d.22.1.1: Fluorescent proteins [54512] (6 proteins)
  6. 2939778Protein Green fluorescent protein, GFP [54513] (6 species)
  7. 2939786Species Jellyfish (Aequorea victoria) [TaxId:6100] [54514] (285 PDB entries)
    Uniprot P42212
  8. 2940189Domain d5b61d_: 5b61 D: [335336]
    automated match to d3st2a_

Details for d5b61d_

PDB Entry: 5b61 (more details), 3.12 Å

PDB Description: extra-superfolder gfp
PDB Compounds: (D:) Green fluorescent protein

SCOPe Domain Sequences for d5b61d_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5b61d_ d.22.1.1 (D:) Green fluorescent protein, GFP {Jellyfish (Aequorea victoria) [TaxId: 6100]}
geelftgvvpilveldgdvnghkfsvrgegegdatngkitlklicttgklpvpwptlvtt
cgygvqcfarypdhmkrhdffksampegyvqertisfkddgtfktraevkfegdtivnri
klkgidfkedgnilghkleynfnshkvyitadkqkngikanfkirhnvedgsvqladhyq
qntpigdgpvrlpdnhylstqsviledpnekrdhmvlhefvtaagit

SCOPe Domain Coordinates for d5b61d_:

Click to download the PDB-style file with coordinates for d5b61d_.
(The format of our PDB-style files is described here.)

Timeline for d5b61d_: