SCOPe 2.08: Domain d1jdbf2: 1jdb F:153-381

Lineage for d1jdbf2 (1jdb F:153-381)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.23: Flavodoxin-like [52171] (15 superfamilies)
   3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345

4. Superfamily c.23.16: Class I glutamine amidotransferase-like [52317] (10 families)
   conserved positions of the oxyanion hole and catalytic nucleophile; different constituent families contain different additional structures

5. Family c.23.16.1: Class I glutamine amidotransferases (GAT) [52318] (12 proteins)
   contains a catalytic Cys-His-Glu triad

6. Protein Carbamoyl phosphate synthetase, small subunit C-terminal domain [52321] (1 species)

7. Species Escherichia coli [TaxId:562] [52322] (10 PDB entries)
   Uniprot P00907

8. Domain d1jdbf2: 1jdb F:153-381 [31434]
   Other proteins in same PDB: d1jdbb1, d1jdbb2, d1jdbb3, d1jdbb4, d1jdbb5, d1jdbb6, d1jdbc1, d1jdbe1, d1jdbe2, d1jdbe3, d1jdbe4, d1jdbe5, d1jdbe6, d1jdbf1, d1jdbh1, d1jdbh2, d1jdbh3, d1jdbh4, d1jdbh5, d1jdbh6, d1jdbi1, d1jdbk1, d1jdbk2, d1jdbk3, d1jdbk4, d1jdbk5, d1jdbk6, d1jdbl1
   complexed with adp, cl, gln, k, mn, net, orn, po4

Details for d1jdbf2

PDB Entry: 1jdb, 2.1 Å

PDB Description: carbamoyl phosphate synthetase from escherichia coli

PDB Compounds: (F:) carbamoyl phosphate synthetase

SCOPe Domain Sequences for d1jdbf2:

Sequence; same for both SEQRES and ATOM records:

>d1jdbf2 c.23.16.1 (F:153-381) Carbamoyl phosphate synthetase, small subunit C-terminal domain {Escherichia coli [TaxId: 562]}
lngmdlakevttaeayswtqgswtltgglpqakkedelpfhvvaydfgakrnilrmlvdr
gcrltivpaqtsaedvlkmnpdgiflsngpgdpapcdyaitaiqkfletdipvfgiclgh
qllalasgaktvkmkfghhggnhpvkdveknvvmitaqnhgfavdeatlpanlrvthksl
fdgtlqgihrtdkpafsfqghpeaspgphdaaplfdhfielieqyrkta

Timeline for d1jdbf2:

• d1jdbf2 first appeared (with stable ids) in SCOP 1.55
  
• d1jdbf2 appears in SCOPe 2.07