SCOPe 2.08: Domain d1jdbk5: 1jdb K:128-402

Lineage for d1jdbk5 (1jdb K:128-402)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.142: ATP-grasp [56058] (2 superfamilies)
   Consists of two subdomains with different alpha+beta folds
   shares functional and structural similarities with the PIPK and protein kinase superfamilies

4. Superfamily d.142.1: Glutathione synthetase ATP-binding domain-like [56059] (11 families)

5. Family d.142.1.2: BC ATP-binding domain-like [56067] (7 proteins)

6. Protein Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains [56076] (1 species)
   duplication: CPS large subunit contains two full BC-like lobes: carboxyphosphate and carbamoyl phosphate domains

7. Species Escherichia coli [TaxId:562] [56077] (10 PDB entries)
   Uniprot P00968

8. Domain d1jdbk5: 1jdb K:128-402 [41556]
   Other proteins in same PDB: d1jdbb1, d1jdbb2, d1jdbb3, d1jdbb4, d1jdbc1, d1jdbc2, d1jdbe1, d1jdbe2, d1jdbe3, d1jdbe4, d1jdbf1, d1jdbf2, d1jdbh1, d1jdbh2, d1jdbh3, d1jdbh4, d1jdbi1, d1jdbi2, d1jdbk1, d1jdbk2, d1jdbk3, d1jdbk4, d1jdbl1, d1jdbl2
   complexed with adp, cl, gln, k, mn, net, orn, po4

Details for d1jdbk5

PDB Entry: 1jdb, 2.1 Å

PDB Description: carbamoyl phosphate synthetase from escherichia coli

PDB Compounds: (K:) carbamoyl phosphate synthetase

SCOPe Domain Sequences for d1jdbk5:

Sequence; same for both SEQRES and ATOM records:

>d1jdbk5 d.142.1.2 (K:128-402) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]}
rrrfdvamkkigletarsgiahtmeealavaadvgfpciirpsftmggsgggiaynreef
eeicargldlsptkellidesligwkeyemevvrdkndnciivcsienfdamgihtgdsi
tvapaqtltdkeyqimrnasmavlreigvetggsnvqfavnpkngrliviemnprvsrss
alaskatgfpiakvaaklavgytldelmnditggrtpasfepsidyvvtkiprfnfekfa
gandrlttqmksvgevmaigrtqqeslqkalrgle

Timeline for d1jdbk5:

• d1jdbk5 first appeared (with stable ids) in SCOP 1.55
  
• d1jdbk5 appears in SCOPe 2.07