SCOPe 2.05: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.05
Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
Fold d.286: TrkA C-terminal domain-like [116725] (1 superfamily)
beta-X-beta(2)-X-beta-alpha; pseudo barrel capped by helix at one end; topological similarity to the HPr-like fold
Superfamily d.286.1: TrkA C-terminal domain-like [116726] (2 families)
Family d.286.1.0: automated matches [228502] (1 protein)
not a true family
Protein automated matches [228504] (1 species)
not a true protein

Species:

Methanothermobacter thermautotrophicus [TaxId:187420] [228505] (8 PDB entries)

Domains for 3kxd:
1. Domain d3kxda2: 3kxd A:245-339 [232736]
  Other proteins in same PDB: d3kxda1, d3kxdb1
  automated match to d2fy8a2
  protein/RNA complex; complexed with cd
2. Domain d3kxdb2: 3kxd B:245-334 [232738]
  Other proteins in same PDB: d3kxda1, d3kxdb1
  automated match to d2fy8a2
  protein/RNA complex; complexed with cd
Domains for 3rbx:
1. Domain d3rbxa2: 3rbx A:245-336 [233429]
  Other proteins in same PDB: d3rbxa1, d3rbxb1, d3rbxc1, d3rbxd1, d3rbxe1, d3rbxf1
  automated match to d2fy8a2
  complexed with ca; mutant
2. Domain d3rbxb2: 3rbx B:245-336 [233427]
  Other proteins in same PDB: d3rbxa1, d3rbxb1, d3rbxc1, d3rbxd1, d3rbxe1, d3rbxf1
  automated match to d2fy8a2
  complexed with ca; mutant
3. Domain d3rbxc2: 3rbx C:245-335 [233431]
  Other proteins in same PDB: d3rbxa1, d3rbxb1, d3rbxc1, d3rbxd1, d3rbxe1, d3rbxf1
  automated match to d2fy8a2
  complexed with ca; mutant
4. Domain d3rbxd2: 3rbx D:245-334 [233436]
  Other proteins in same PDB: d3rbxa1, d3rbxb1, d3rbxc1, d3rbxd1, d3rbxe1, d3rbxf1
  automated match to d2fy8a2
  complexed with ca; mutant
5. Domain d3rbxe2: 3rbx E:245-335 [233437]
  Other proteins in same PDB: d3rbxa1, d3rbxb1, d3rbxc1, d3rbxd1, d3rbxe1, d3rbxf1
  automated match to d2fy8a2
  complexed with ca; mutant
6. Domain d3rbxf2: 3rbx F:245-334 [233435]
  Other proteins in same PDB: d3rbxa1, d3rbxb1, d3rbxc1, d3rbxd1, d3rbxe1, d3rbxf1
  automated match to d2fy8a2
  complexed with ca; mutant

Domains for 4ei2:

Domain d4ei2a2: 4ei2 A:245-337 [266192]
Other proteins in same PDB: d4ei2a1, d4ei2b1, d4ei2c1, d4ei2d1, d4ei2e1, d4ei2f1, d4ei2g1, d4ei2h1, d4ei2i1, d4ei2j1, d4ei2k1, d4ei2l1, d4ei2m1, d4ei2n1, d4ei2o1, d4ei2p1
automated match to d2aema2
complexed with ba

Domain d4ei2b2: 4ei2 B:245-336 [266194]
Other proteins in same PDB: d4ei2a1, d4ei2b1, d4ei2c1, d4ei2d1, d4ei2e1, d4ei2f1, d4ei2g1, d4ei2h1, d4ei2i1, d4ei2j1, d4ei2k1, d4ei2l1, d4ei2m1, d4ei2n1, d4ei2o1, d4ei2p1
automated match to d2aema2
complexed with ba

Domain d4ei2c2: 4ei2 C:245-338 [266196]
Other proteins in same PDB: d4ei2a1, d4ei2b1, d4ei2c1, d4ei2d1, d4ei2e1, d4ei2f1, d4ei2g1, d4ei2h1, d4ei2i1, d4ei2j1, d4ei2k1, d4ei2l1, d4ei2m1, d4ei2n1, d4ei2o1, d4ei2p1
automated match to d2aema2
complexed with ba

Domain d4ei2d2: 4ei2 D:245-339 [266198]
Other proteins in same PDB: d4ei2a1, d4ei2b1, d4ei2c1, d4ei2d1, d4ei2e1, d4ei2f1, d4ei2g1, d4ei2h1, d4ei2i1, d4ei2j1, d4ei2k1, d4ei2l1, d4ei2m1, d4ei2n1, d4ei2o1, d4ei2p1
automated match to d2aema2
complexed with ba

Domain d4ei2e2: 4ei2 E:245-337 [266200]
Other proteins in same PDB: d4ei2a1, d4ei2b1, d4ei2c1, d4ei2d1, d4ei2e1, d4ei2f1, d4ei2g1, d4ei2h1, d4ei2i1, d4ei2j1, d4ei2k1, d4ei2l1, d4ei2m1, d4ei2n1, d4ei2o1, d4ei2p1
automated match to d2aema2
complexed with ba

Domain d4ei2f2: 4ei2 F:245-337 [266202]
Other proteins in same PDB: d4ei2a1, d4ei2b1, d4ei2c1, d4ei2d1, d4ei2e1, d4ei2f1, d4ei2g1, d4ei2h1, d4ei2i1, d4ei2j1, d4ei2k1, d4ei2l1, d4ei2m1, d4ei2n1, d4ei2o1, d4ei2p1
automated match to d2aema2
complexed with ba

Domain d4ei2g2: 4ei2 G:245-339 [266204]
Other proteins in same PDB: d4ei2a1, d4ei2b1, d4ei2c1, d4ei2d1, d4ei2e1, d4ei2f1, d4ei2g1, d4ei2h1, d4ei2i1, d4ei2j1, d4ei2k1, d4ei2l1, d4ei2m1, d4ei2n1, d4ei2o1, d4ei2p1
automated match to d2aema2
complexed with ba

Domain d4ei2h2: 4ei2 H:245-337 [266206]
Other proteins in same PDB: d4ei2a1, d4ei2b1, d4ei2c1, d4ei2d1, d4ei2e1, d4ei2f1, d4ei2g1, d4ei2h1, d4ei2i1, d4ei2j1, d4ei2k1, d4ei2l1, d4ei2m1, d4ei2n1, d4ei2o1, d4ei2p1
automated match to d2aema2
complexed with ba

Domain d4ei2i2: 4ei2 I:245-336 [266208]
Other proteins in same PDB: d4ei2a1, d4ei2b1, d4ei2c1, d4ei2d1, d4ei2e1, d4ei2f1, d4ei2g1, d4ei2h1, d4ei2i1, d4ei2j1, d4ei2k1, d4ei2l1, d4ei2m1, d4ei2n1, d4ei2o1, d4ei2p1
automated match to d2aema2
complexed with ba

Domain d4ei2j2: 4ei2 J:245-338 [266210]
Other proteins in same PDB: d4ei2a1, d4ei2b1, d4ei2c1, d4ei2d1, d4ei2e1, d4ei2f1, d4ei2g1, d4ei2h1, d4ei2i1, d4ei2j1, d4ei2k1, d4ei2l1, d4ei2m1, d4ei2n1, d4ei2o1, d4ei2p1
automated match to d2aema2
complexed with ba

Domain d4ei2k2: 4ei2 K:245-338 [266212]
Other proteins in same PDB: d4ei2a1, d4ei2b1, d4ei2c1, d4ei2d1, d4ei2e1, d4ei2f1, d4ei2g1, d4ei2h1, d4ei2i1, d4ei2j1, d4ei2k1, d4ei2l1, d4ei2m1, d4ei2n1, d4ei2o1, d4ei2p1
automated match to d2aema2
complexed with ba

Domain d4ei2l2: 4ei2 L:245-336 [266214]
Other proteins in same PDB: d4ei2a1, d4ei2b1, d4ei2c1, d4ei2d1, d4ei2e1, d4ei2f1, d4ei2g1, d4ei2h1, d4ei2i1, d4ei2j1, d4ei2k1, d4ei2l1, d4ei2m1, d4ei2n1, d4ei2o1, d4ei2p1
automated match to d2aema2
complexed with ba

Domain d4ei2m2: 4ei2 M:245-338 [266216]
Other proteins in same PDB: d4ei2a1, d4ei2b1, d4ei2c1, d4ei2d1, d4ei2e1, d4ei2f1, d4ei2g1, d4ei2h1, d4ei2i1, d4ei2j1, d4ei2k1, d4ei2l1, d4ei2m1, d4ei2n1, d4ei2o1, d4ei2p1
automated match to d2aema2
complexed with ba

Domain d4ei2n2: 4ei2 N:245-338 [266218]
Other proteins in same PDB: d4ei2a1, d4ei2b1, d4ei2c1, d4ei2d1, d4ei2e1, d4ei2f1, d4ei2g1, d4ei2h1, d4ei2i1, d4ei2j1, d4ei2k1, d4ei2l1, d4ei2m1, d4ei2n1, d4ei2o1, d4ei2p1
automated match to d2aema2
complexed with ba

Domain d4ei2o2: 4ei2 O:245-335 [266220]
Other proteins in same PDB: d4ei2a1, d4ei2b1, d4ei2c1, d4ei2d1, d4ei2e1, d4ei2f1, d4ei2g1, d4ei2h1, d4ei2i1, d4ei2j1, d4ei2k1, d4ei2l1, d4ei2m1, d4ei2n1, d4ei2o1, d4ei2p1
automated match to d2aema2
complexed with ba

Domain d4ei2p2: 4ei2 P:245-335 [266222]
Other proteins in same PDB: d4ei2a1, d4ei2b1, d4ei2c1, d4ei2d1, d4ei2e1, d4ei2f1, d4ei2g1, d4ei2h1, d4ei2i1, d4ei2j1, d4ei2k1, d4ei2l1, d4ei2m1, d4ei2n1, d4ei2o1, d4ei2p1
automated match to d2aema2
complexed with ba

Domains for 4l73:
1. Domain d4l73a2: 4l73 A:245-338 [235285]
  Other proteins in same PDB: d4l73a1, d4l73b1
  automated match to d4l74a2
  complexed with ca, cl, na
2. Domain d4l73b2: 4l73 B:245-336 [235287]
  Other proteins in same PDB: d4l73a1, d4l73b1
  automated match to d4l74a2
  complexed with ca, cl, na
Domains for 4l74:
1. Domain d4l74a2: 4l74 A:245-339 [228510]
  Other proteins in same PDB: d4l74a1, d4l74b1
  automated match to d2fy8a2
  complexed with ca
2. Domain d4l74b2: 4l74 B:245-340 [235289]
  Other proteins in same PDB: d4l74a1, d4l74b1
  automated match to d4l74a2
  complexed with ca
Domains for 4l75:
1. Domain d4l75a2: 4l75 A:245-339 [235291]
  Other proteins in same PDB: d4l75a1, d4l75b1, d4l75c1, d4l75d1, d4l75e1, d4l75f1
  automated match to d4l75d2
  complexed with ca; mutant
2. Domain d4l75b2: 4l75 B:245-338 [235294]
  Other proteins in same PDB: d4l75a1, d4l75b1, d4l75c1, d4l75d1, d4l75e1, d4l75f1
  automated match to d4l75d2
  complexed with ca; mutant
3. Domain d4l75c2: 4l75 C:245-336 [235304]
  Other proteins in same PDB: d4l75a1, d4l75b1, d4l75c1, d4l75d1, d4l75e1, d4l75f1
  automated match to d4l75d2
  complexed with ca; mutant
4. Domain d4l75d2: 4l75 D:245-338 [228512]
  Other proteins in same PDB: d4l75a1, d4l75b1, d4l75c1, d4l75d1, d4l75e1, d4l75f1
  automated match to d2fy8a2
  complexed with ca; mutant
5. Domain d4l75e2: 4l75 E:245-336 [235306]
  Other proteins in same PDB: d4l75a1, d4l75b1, d4l75c1, d4l75d1, d4l75e1, d4l75f1
  automated match to d4l75d2
  complexed with ca; mutant
6. Domain d4l75f2: 4l75 F:245-338 [235298]
  Other proteins in same PDB: d4l75a1, d4l75b1, d4l75c1, d4l75d1, d4l75e1, d4l75f1
  automated match to d4l75d2
  complexed with ca; mutant
Domains for 4l76:
1. Domain d4l76a2: 4l76 A:245-339 [235302]
  Other proteins in same PDB: d4l76a1, d4l76b1, d4l76c1, d4l76d1, d4l76e1, d4l76f1
  automated match to d4l76e2
  complexed with ca, na; mutant
2. Domain d4l76b2: 4l76 B:245-338 [235300]
  Other proteins in same PDB: d4l76a1, d4l76b1, d4l76c1, d4l76d1, d4l76e1, d4l76f1
  automated match to d4l76e2
  complexed with ca, na; mutant
3. Domain d4l76c2: 4l76 C:245-336 [235308]
  Other proteins in same PDB: d4l76a1, d4l76b1, d4l76c1, d4l76d1, d4l76e1, d4l76f1
  automated match to d4l76d2
  complexed with ca, na; mutant
4. Domain d4l76d2: 4l76 D:245-337 [228507]
  Other proteins in same PDB: d4l76a1, d4l76b1, d4l76c1, d4l76d1, d4l76e1, d4l76f1
  automated match to d2fy8a2
  complexed with ca, na; mutant
5. Domain d4l76e2: 4l76 E:245-337 [228506]
  Other proteins in same PDB: d4l76a1, d4l76b1, d4l76c1, d4l76d1, d4l76e1, d4l76f1
  automated match to d2fy8a2
  complexed with ca, na; mutant
6. Domain d4l76f2: 4l76 F:245-338 [228508]
  Other proteins in same PDB: d4l76a1, d4l76b1, d4l76c1, d4l76d1, d4l76e1, d4l76f1
  automated match to d2fy8a2
  complexed with ca, na; mutant

Domains for 4ro0:

Domain d4ro0a2: 4ro0 A:245-336 [278718]
Other proteins in same PDB: d4ro0a1, d4ro0b1, d4ro0c1, d4ro0d1, d4ro0e1, d4ro0f1, d4ro0g1, d4ro0h1, d4ro0i1, d4ro0j1, d4ro0k1, d4ro0l1, d4ro0m1, d4ro0n1, d4ro0o1, d4ro0p1, d4ro0q1, d4ro0r1, d4ro0s1, d4ro0t1
automated match to d2aema2

Domain d4ro0b2: 4ro0 B:245-336 [278715]
Other proteins in same PDB: d4ro0a1, d4ro0b1, d4ro0c1, d4ro0d1, d4ro0e1, d4ro0f1, d4ro0g1, d4ro0h1, d4ro0i1, d4ro0j1, d4ro0k1, d4ro0l1, d4ro0m1, d4ro0n1, d4ro0o1, d4ro0p1, d4ro0q1, d4ro0r1, d4ro0s1, d4ro0t1
automated match to d2aema2

Domain d4ro0c2: 4ro0 C:245-336 [278721]
Other proteins in same PDB: d4ro0a1, d4ro0b1, d4ro0c1, d4ro0d1, d4ro0e1, d4ro0f1, d4ro0g1, d4ro0h1, d4ro0i1, d4ro0j1, d4ro0k1, d4ro0l1, d4ro0m1, d4ro0n1, d4ro0o1, d4ro0p1, d4ro0q1, d4ro0r1, d4ro0s1, d4ro0t1
automated match to d2aema2

Domain d4ro0d2: 4ro0 D:245-336 [278725]
Other proteins in same PDB: d4ro0a1, d4ro0b1, d4ro0c1, d4ro0d1, d4ro0e1, d4ro0f1, d4ro0g1, d4ro0h1, d4ro0i1, d4ro0j1, d4ro0k1, d4ro0l1, d4ro0m1, d4ro0n1, d4ro0o1, d4ro0p1, d4ro0q1, d4ro0r1, d4ro0s1, d4ro0t1
automated match to d2aema2

Domain d4ro0e2: 4ro0 E:245-336 [278727]
Other proteins in same PDB: d4ro0a1, d4ro0b1, d4ro0c1, d4ro0d1, d4ro0e1, d4ro0f1, d4ro0g1, d4ro0h1, d4ro0i1, d4ro0j1, d4ro0k1, d4ro0l1, d4ro0m1, d4ro0n1, d4ro0o1, d4ro0p1, d4ro0q1, d4ro0r1, d4ro0s1, d4ro0t1
automated match to d2aema2

Domain d4ro0f2: 4ro0 F:245-336 [278731]
Other proteins in same PDB: d4ro0a1, d4ro0b1, d4ro0c1, d4ro0d1, d4ro0e1, d4ro0f1, d4ro0g1, d4ro0h1, d4ro0i1, d4ro0j1, d4ro0k1, d4ro0l1, d4ro0m1, d4ro0n1, d4ro0o1, d4ro0p1, d4ro0q1, d4ro0r1, d4ro0s1, d4ro0t1
automated match to d2aema2

Domain d4ro0g2: 4ro0 G:245-336 [278723]
Other proteins in same PDB: d4ro0a1, d4ro0b1, d4ro0c1, d4ro0d1, d4ro0e1, d4ro0f1, d4ro0g1, d4ro0h1, d4ro0i1, d4ro0j1, d4ro0k1, d4ro0l1, d4ro0m1, d4ro0n1, d4ro0o1, d4ro0p1, d4ro0q1, d4ro0r1, d4ro0s1, d4ro0t1
automated match to d2aema2

Domain d4ro0h2: 4ro0 H:245-336 [278735]
Other proteins in same PDB: d4ro0a1, d4ro0b1, d4ro0c1, d4ro0d1, d4ro0e1, d4ro0f1, d4ro0g1, d4ro0h1, d4ro0i1, d4ro0j1, d4ro0k1, d4ro0l1, d4ro0m1, d4ro0n1, d4ro0o1, d4ro0p1, d4ro0q1, d4ro0r1, d4ro0s1, d4ro0t1
automated match to d2aema2

Domain d4ro0i2: 4ro0 I:245-336 [278729]
Other proteins in same PDB: d4ro0a1, d4ro0b1, d4ro0c1, d4ro0d1, d4ro0e1, d4ro0f1, d4ro0g1, d4ro0h1, d4ro0i1, d4ro0j1, d4ro0k1, d4ro0l1, d4ro0m1, d4ro0n1, d4ro0o1, d4ro0p1, d4ro0q1, d4ro0r1, d4ro0s1, d4ro0t1
automated match to d2aema2

Domain d4ro0j2: 4ro0 J:245-336 [278737]
Other proteins in same PDB: d4ro0a1, d4ro0b1, d4ro0c1, d4ro0d1, d4ro0e1, d4ro0f1, d4ro0g1, d4ro0h1, d4ro0i1, d4ro0j1, d4ro0k1, d4ro0l1, d4ro0m1, d4ro0n1, d4ro0o1, d4ro0p1, d4ro0q1, d4ro0r1, d4ro0s1, d4ro0t1
automated match to d2aema2

Domain d4ro0k2: 4ro0 K:245-336 [278733]
Other proteins in same PDB: d4ro0a1, d4ro0b1, d4ro0c1, d4ro0d1, d4ro0e1, d4ro0f1, d4ro0g1, d4ro0h1, d4ro0i1, d4ro0j1, d4ro0k1, d4ro0l1, d4ro0m1, d4ro0n1, d4ro0o1, d4ro0p1, d4ro0q1, d4ro0r1, d4ro0s1, d4ro0t1
automated match to d2aema2

Domain d4ro0l2: 4ro0 L:245-336 [278741]
Other proteins in same PDB: d4ro0a1, d4ro0b1, d4ro0c1, d4ro0d1, d4ro0e1, d4ro0f1, d4ro0g1, d4ro0h1, d4ro0i1, d4ro0j1, d4ro0k1, d4ro0l1, d4ro0m1, d4ro0n1, d4ro0o1, d4ro0p1, d4ro0q1, d4ro0r1, d4ro0s1, d4ro0t1
automated match to d2aema2

Domain d4ro0m2: 4ro0 M:245-336 [278750]
Other proteins in same PDB: d4ro0a1, d4ro0b1, d4ro0c1, d4ro0d1, d4ro0e1, d4ro0f1, d4ro0g1, d4ro0h1, d4ro0i1, d4ro0j1, d4ro0k1, d4ro0l1, d4ro0m1, d4ro0n1, d4ro0o1, d4ro0p1, d4ro0q1, d4ro0r1, d4ro0s1, d4ro0t1
automated match to d2aema2

Domain d4ro0n2: 4ro0 N:245-336 [278739]
Other proteins in same PDB: d4ro0a1, d4ro0b1, d4ro0c1, d4ro0d1, d4ro0e1, d4ro0f1, d4ro0g1, d4ro0h1, d4ro0i1, d4ro0j1, d4ro0k1, d4ro0l1, d4ro0m1, d4ro0n1, d4ro0o1, d4ro0p1, d4ro0q1, d4ro0r1, d4ro0s1, d4ro0t1
automated match to d2aema2

Domain d4ro0o2: 4ro0 O:245-336 [278748]
Other proteins in same PDB: d4ro0a1, d4ro0b1, d4ro0c1, d4ro0d1, d4ro0e1, d4ro0f1, d4ro0g1, d4ro0h1, d4ro0i1, d4ro0j1, d4ro0k1, d4ro0l1, d4ro0m1, d4ro0n1, d4ro0o1, d4ro0p1, d4ro0q1, d4ro0r1, d4ro0s1, d4ro0t1
automated match to d2aema2

Domain d4ro0p2: 4ro0 P:245-336 [278752]
Other proteins in same PDB: d4ro0a1, d4ro0b1, d4ro0c1, d4ro0d1, d4ro0e1, d4ro0f1, d4ro0g1, d4ro0h1, d4ro0i1, d4ro0j1, d4ro0k1, d4ro0l1, d4ro0m1, d4ro0n1, d4ro0o1, d4ro0p1, d4ro0q1, d4ro0r1, d4ro0s1, d4ro0t1
automated match to d2aema2

Domain d4ro0q2: 4ro0 Q:245-336 [278754]
Other proteins in same PDB: d4ro0a1, d4ro0b1, d4ro0c1, d4ro0d1, d4ro0e1, d4ro0f1, d4ro0g1, d4ro0h1, d4ro0i1, d4ro0j1, d4ro0k1, d4ro0l1, d4ro0m1, d4ro0n1, d4ro0o1, d4ro0p1, d4ro0q1, d4ro0r1, d4ro0s1, d4ro0t1
automated match to d2aema2

Domain d4ro0r2: 4ro0 R:245-336 [278756]
Other proteins in same PDB: d4ro0a1, d4ro0b1, d4ro0c1, d4ro0d1, d4ro0e1, d4ro0f1, d4ro0g1, d4ro0h1, d4ro0i1, d4ro0j1, d4ro0k1, d4ro0l1, d4ro0m1, d4ro0n1, d4ro0o1, d4ro0p1, d4ro0q1, d4ro0r1, d4ro0s1, d4ro0t1
automated match to d2aema2

Domain d4ro0s2: 4ro0 S:245-336 [278744]
Other proteins in same PDB: d4ro0a1, d4ro0b1, d4ro0c1, d4ro0d1, d4ro0e1, d4ro0f1, d4ro0g1, d4ro0h1, d4ro0i1, d4ro0j1, d4ro0k1, d4ro0l1, d4ro0m1, d4ro0n1, d4ro0o1, d4ro0p1, d4ro0q1, d4ro0r1, d4ro0s1, d4ro0t1
automated match to d2aema2

Domain d4ro0t2: 4ro0 T:245-336 [278746]
Other proteins in same PDB: d4ro0a1, d4ro0b1, d4ro0c1, d4ro0d1, d4ro0e1, d4ro0f1, d4ro0g1, d4ro0h1, d4ro0i1, d4ro0j1, d4ro0k1, d4ro0l1, d4ro0m1, d4ro0n1, d4ro0o1, d4ro0p1, d4ro0q1, d4ro0r1, d4ro0s1, d4ro0t1
automated match to d2aema2

More info for Protein automated matches from d.286.1.0: automated matches

Timeline for Protein automated matches from d.286.1.0: automated matches:

Protein automated matches from d.286.1.0: automated matches first appeared in SCOPe 2.03
Protein automated matches from d.286.1.0: automated matches appears in SCOPe 2.04
Protein automated matches from d.286.1.0: automated matches appears in SCOPe 2.06
Protein automated matches from d.286.1.0: automated matches appears in the current release, SCOPe 2.08