SCOPe 2.06: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.06
Class a: All alpha proteins [46456] (289 folds)
Fold a.40: CH domain-like [47575] (3 superfamilies)
core: 4 helices: bundle
Superfamily a.40.1: Calponin-homology domain, CH-domain [47576] (2 families)
Family a.40.1.0: automated matches [227151] (1 protein)
not a true family
Protein automated matches [226856] (3 species)
not a true protein

Species:

Human (Homo sapiens) [TaxId:9606] [224978] (30 PDB entries)
1. Domains for 1tjt:
  1. Domain d1tjta1: 1tjt A:42-155 [202921]
    automated match to d1sh5a1
  2. Domain d1tjta2: 1tjt A:156-265 [202922]
    automated match to d1sh5a2
2. Domains for 1wku:
  1. Domain d1wkua1: 1wku A:42-155 [202997]
    automated match to d1sh5a1
  2. Domain d1wkua2: 1wku A:156-266 [202998]
    automated match to d1sh5a2
  3. Domain d1wkub1: 1wku B:42-155 [202999]
    automated match to d1sh5a1
  4. Domain d1wkub2: 1wku B:156-268 [203000]
    automated match to d1sh5a2
3. Domain for 1wyl:
  - Domain d1wyla1: 1wyl A:8-110 [240931]
    Other proteins in same PDB: d1wyla2, d1wyla3
    automated match to d1bkra_
4. Domain for 1wyn:
  - Domain d1wyna1: 1wyn A:8-140 [264205]
    Other proteins in same PDB: d1wyna2, d1wyna3
    automated match to d1wypa_
5. Domain for 1wyp:
  - Domain d1wypa1: 1wyp A:8-130 [240933]
    Other proteins in same PDB: d1wypa2, d1wypa3
    automated match to d1ujoa_
6. Domain for 1wyr:
  - Domain d1wyra1: 1wyr A:8-115 [240935]
    Other proteins in same PDB: d1wyra2, d1wyra3
    automated match to d1ujoa_
7. Domain for 2d86:
  - Domain d2d86a1: 2d86 A:8-137 [241510]
    Other proteins in same PDB: d2d86a2, d2d86a3
    automated match to d1ujoa_
8. Domain for 2d87:
  - Domain d2d87a1: 2d87 A:8-122 [241511]
    Other proteins in same PDB: d2d87a2, d2d87a3
    automated match to d1wjoa_
9. Domain for 2d88:
  - Domain d2d88a1: 2d88 A:8-115 [241512]
    Other proteins in same PDB: d2d88a2, d2d88a3
    automated match to d1bkra_
10. Domain for 2d89:
  - Domain d2d89a1: 2d89 A:8-113 [241513]
    Other proteins in same PDB: d2d89a2, d2d89a3
    automated match to d1bkra_
11. Domain for 2dk9:
  - Domain d2dk9a1: 2dk9 A:1-109 [241581]
    Other proteins in same PDB: d2dk9a2
    automated match to d1bkra_
12. Domain for 2e9k:
  - Domain d2e9ka1: 2e9k A:8-121 [241709]
    Other proteins in same PDB: d2e9ka2
    automated match to d1bkra_
13. Domains for 2eyi:
  1. Domain d2eyia1: 2eyi A:30-141 [204151]
    Other proteins in same PDB: d2eyia3, d2eyia4
    automated match to d1sh5a1
  2. Domain d2eyia2: 2eyi A:142-253 [204152]
    Other proteins in same PDB: d2eyia3, d2eyia4
    automated match to d1sh5a2
14. Domains for 2eyn:
  1. Domain d2eyna1: 2eyn A:30-141 [204153]
    Other proteins in same PDB: d2eyna3, d2eyna4
    automated match to d1sh5a1
  2. Domain d2eyna2: 2eyn A:142-253 [204154]
    Other proteins in same PDB: d2eyna3, d2eyna4
    automated match to d1sh5a2
15. Domain for 2l3g:
  - Domain d2l3ga1: 2l3g A:11-126 [264366]
    Other proteins in same PDB: d2l3ga2
    automated match to d1wyra_
16. Domains for 2r0o:
  1. Domain d2r0oa1: 2r0o A:47-160 [205920]
    Other proteins in same PDB: d2r0oa3, d2r0oa4, d2r0ob3, d2r0ob4
    automated match to d1sh5a1
    complexed with gol; mutant
  2. Domain d2r0oa2: 2r0o A:161-271 [205921]
    Other proteins in same PDB: d2r0oa3, d2r0oa4, d2r0ob3, d2r0ob4
    automated match to d1sh5a2
    complexed with gol; mutant
  3. Domain d2r0ob1: 2r0o B:47-160 [205922]
    Other proteins in same PDB: d2r0oa3, d2r0oa4, d2r0ob3, d2r0ob4
    automated match to d1sh5a1
    complexed with gol; mutant
  4. Domain d2r0ob2: 2r0o B:161-271 [205923]
    Other proteins in same PDB: d2r0oa3, d2r0oa4, d2r0ob3, d2r0ob4
    automated match to d1sh5a2
    complexed with gol; mutant
17. Domain for 2rr8:
  - Domain d2rr8a1: 2rr8 A:26-210 [243754]
    Other proteins in same PDB: d2rr8a2
    automated match to d1p5sa_
18. Domains for 2wa5:
  1. Domain d2wa5a1: 2wa5 A:0-124 [206735]
    automated match to d1sh5a1
    complexed with co3, so4
  2. Domain d2wa5a2: 2wa5 A:138-242 [206736]
    automated match to d1sh5a2
    complexed with co3, so4
19. Domains for 2wa6:
  1. Domain d2wa6a1: 2wa6 A:8-124 [206737]
    automated match to d1sh5a1
    complexed with co3; mutant
  2. Domain d2wa6a2: 2wa6 A:137-239 [206738]
    automated match to d1sh5a2
    complexed with co3; mutant
20. Domains for 2wa7:
  1. Domain d2wa7a1: 2wa7 A:12-124 [206739]
    automated match to d1sh5a1
    complexed with cac, co3; mutant
  2. Domain d2wa7a2: 2wa7 A:137-240 [206740]
    automated match to d1sh5a2
    complexed with cac, co3; mutant
21. Domains for 3f7p:
  1. Domain d3f7pa2: 3f7p A:181-290 [209821]
    Other proteins in same PDB: d3f7pa1, d3f7pb1, d3f7pc1, d3f7pc2, d3f7pd1, d3f7pd2
    automated match to d1sh5a2
    complexed with ca, edo, peg
  2. Domain d3f7pb2: 3f7p B:181-290 [209823]
    Other proteins in same PDB: d3f7pa1, d3f7pb1, d3f7pc1, d3f7pc2, d3f7pd1, d3f7pd2
    automated match to d1sh5a2
    complexed with ca, edo, peg
22. Domains for 3fer:
  1. Domain d3fera1: 3fer A:23-134 [209880]
    automated match to d1sh5a1
    complexed with acy
  2. Domain d3fera2: 3fer A:148-261 [209881]
    automated match to d1sh5a2
    complexed with acy
  3. Domain d3ferb1: 3fer B:23-134 [209882]
    automated match to d1sh5a1
    complexed with acy
  4. Domain d3ferb2: 3fer B:148-261 [209883]
    automated match to d1sh5a2
    complexed with acy
  5. Domain d3ferc1: 3fer C:24-134 [209884]
    automated match to d1sh5a1
    complexed with acy
  6. Domain d3ferc2: 3fer C:148-261 [209885]
    automated match to d1sh5a2
    complexed with acy
  7. Domain d3ferd1: 3fer D:23-134 [209886]
    automated match to d1sh5a1
    complexed with acy
  8. Domain d3ferd2: 3fer D:148-261 [209887]
    automated match to d1sh5a2
    complexed with acy
23. Domains for 3hoc:
  1. Domain d3hoca1: 3hoc A:39-151 [211167]
    automated match to d1sh5a1
    complexed with po4; mutant
  2. Domain d3hoca2: 3hoc A:166-265 [211168]
    automated match to d1sh5a2
    complexed with po4; mutant
  3. Domain d3hocb1: 3hoc B:42-151 [211169]
    automated match to d1sh5a1
    complexed with po4; mutant
  4. Domain d3hocb2: 3hoc B:166-269 [211170]
    automated match to d1sh5a2
    complexed with po4; mutant
24. Domains for 3hop:
  1. Domain d3hopa1: 3hop A:37-151 [211174]
    automated match to d1sh5a1
    complexed with po4
  2. Domain d3hopa2: 3hop A:163-269 [211175]
    automated match to d1sh5a2
    complexed with po4
  3. Domain d3hopb1: 3hop B:39-161 [211176]
    automated match to d1sh5a1
    complexed with po4
  4. Domain d3hopb2: 3hop B:162-269 [211177]
    automated match to d1sh5a2
    complexed with po4
25. Domains for 3hor:
  1. Domain d3hora1: 3hor A:43-151 [211178]
    automated match to d1sh5a1
    complexed with po4
  2. Domain d3hora2: 3hor A:166-264 [211179]
    automated match to d1sh5a2
    complexed with po4
  3. Domain d3horb1: 3hor B:44-151 [211180]
    automated match to d1sh5a1
    complexed with po4
  4. Domain d3horb2: 3hor B:172-269 [211181]
    automated match to d1sh5a2
    complexed with po4
26. Domains for 4q59:
  1. Domain d4q59a2: 4q59 A:154-263 [263633]
    Other proteins in same PDB: d4q59a1, d4q59b1
    automated match to d4q59b2
  2. Domain d4q59b2: 4q59 B:154-263 [258318]
    Other proteins in same PDB: d4q59a1, d4q59b1
    automated match to d3f7pa2
27. Domains for 5a36:
  1. Domain d5a36a1: 5a36 A:19-146 [318678]
    automated match to d2wa5a1
    mutant
  2. Domain d5a36a2: 5a36 A:147-257 [318679]
    automated match to d2wa5a2
    mutant
  3. Domain d5a36b1: 5a36 B:33-148 [318724]
    automated match to d1wkua1
    mutant
  4. Domain d5a36b2: 5a36 B:149-256 [318725]
    automated match to d1tjta2
    mutant
28. Domains for 5a37:
  1. Domain d5a37a1: 5a37 A:34-148 [318726]
    automated match to d1wkua1
    mutant
  2. Domain d5a37a2: 5a37 A:149-257 [318727]
    automated match to d1tjta2
    mutant
  3. Domain d5a37b1: 5a37 B:35-148 [318763]
    automated match to d1wkua1
    mutant
  4. Domain d5a37b2: 5a37 B:149-257 [318764]
    automated match to d1tjta2
    mutant
29. Domains for 5a38:
  1. Domain d5a38a1: 5a38 A:35-148 [318682]
    automated match to d1wkua1
    mutant
  2. Domain d5a38a2: 5a38 A:149-257 [318683]
    automated match to d1tjta2
    mutant
  3. Domain d5a38b1: 5a38 B:35-148 [318722]
    automated match to d1wkua1
    mutant
  4. Domain d5a38b2: 5a38 B:149-257 [318723]
    automated match to d1tjta2
    mutant
30. Domains for 5a4b:
  1. Domain d5a4ba1: 5a4b A:35-148 [318680]
    automated match to d1wkua1
    mutant
  2. Domain d5a4ba2: 5a4b A:149-257 [318681]
    automated match to d1tjta2
    mutant
  3. Domain d5a4bb1: 5a4b B:35-148 [318751]
    automated match to d1wkua1
    mutant
  4. Domain d5a4bb2: 5a4b B:149-257 [318752]
    automated match to d1tjta2
    mutant
Mouse (Mus musculus) [TaxId:10090] [255300] (3 PDB entries)
1. Domain for 2jv9:
  - Domain d2jv9a1: 2jv9 A:6-119 [242290]
    Other proteins in same PDB: d2jv9a2
    automated match to d1bhdb_
2. Domain for 2k3s:
  - Domain d2k3sa1: 2k3s A:6-119 [238762]
    Other proteins in same PDB: d2k3sa2, d2k3sb1
    automated match to d1bhdb_
3. Domain for 4q57:
  - Domain d4q57b2: 4q57 B:154-263 [258316]
    Other proteins in same PDB: d4q57b1, d4q57b3
    automated match to d1mb8a2
    complexed with ca, cl, edo, gol, mg
Schizosaccharomyces pombe [TaxId:284812] [312738] (1 PDB entry)
- Domains for 5bvr:
  1. Domain d5bvra1: 5bvr A:6-120 [312739]
    automated match to d1wkua1
    complexed with zn
  2. Domain d5bvra2: 5bvr A:121-234 [312740]
    automated match to d1tjta2
    complexed with zn

More info for Protein automated matches from a.40.1.0: automated matches

Timeline for Protein automated matches from a.40.1.0: automated matches:

Protein automated matches from a.40.1.0: automated matches first appeared in SCOPe 2.03
Protein automated matches from a.40.1.0: automated matches appears in SCOPe 2.05
Protein automated matches from a.40.1.0: automated matches appears in SCOPe 2.07
Protein automated matches from a.40.1.0: automated matches appears in the current release, SCOPe 2.08