Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2850482Fold c.6: 7-stranded beta/alpha barrel [51988] (3 superfamilies)
    variant of beta/alpha barrel; parallel beta-sheet barrel, closed, n=7, S=8; strand order 1234567; some members may have fewer strands
  4. 2850572Superfamily c.6.2: Glycoside hydrolase/deacetylase [88713] (9 families) (S)
    in the different families beta-barrels are similarly distorted but may vary in the number of strands
  5. 2850731Family c.6.2.0: automated matches [195981] (1 protein)
    not a true family
  6. 2850732Protein automated matches [195982] (7 species)
    not a true protein

Species:

  1. 2850733Anthrax bacillus (Bacillus anthracis) [TaxId:1392] [346279] (1 PDB entry)
  2. 2850736Arthrobacter sp. [TaxId:1652545] [337174] (1 PDB entry)
  3. 2850738Arthrobacter sp. [TaxId:1914985] [340900] (1 PDB entry)
  4. 2850740Bacillus cereus [TaxId:226900] [353696] (2 PDB entries)
    1. Domains for 4l1g:
      1. 2850741Domain d4l1ga_: 4l1g A: [413899]
        automated match to d5o6yb_
        complexed with act, so4
      2. 2850742Domain d4l1gb_: 4l1g B: [413900]
        automated match to d5o6yb_
        complexed with act, so4
      3. 2850743Domain d4l1gc_: 4l1g C: [413901]
        automated match to d5o6yb_
        complexed with act, so4
      4. 2850744Domain d4l1gd_: 4l1g D: [413902]
        automated match to d5o6yb_
        complexed with act, so4
    2. Domains for 5o6y:
      1. 2850745Domain d5o6ya_: 5o6y A: [353719]
        automated match to d4m1ba_
        complexed with 5ya, cl, dms, na, pe3, peg, pg0, so4, zn
      2. 2850746Domain d5o6yb_: 5o6y B: [353744]
        automated match to d4m1ba_
        complexed with 5ya, cl, dms, na, pe3, peg, pg0, so4, zn
      3. 2850747Domain d5o6yc_: 5o6y C: [353712]
        automated match to d4m1ba_
        complexed with 5ya, cl, dms, na, pe3, peg, pg0, so4, zn
      4. 2850748Domain d5o6yd_: 5o6y D: [353697]
        automated match to d4m1ba_
        complexed with 5ya, cl, dms, na, pe3, peg, pg0, so4, zn
  5. 2850749Emericella nidulans [TaxId:162425] [195983] (1 PDB entry)
  6. 2850752Encephalitozoon cuniculi [TaxId:284813] [255627] (1 PDB entry)
  7. 2850754Uncultured bacterium [TaxId:77133] [394381] (1 PDB entry)

More info for Protein automated matches from c.6.2.0: automated matches

Timeline for Protein automated matches from c.6.2.0: automated matches: