SCOPe 2.07: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.07
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.69: alpha/beta-Hydrolases [53473] (1 superfamily)
core: 3 layers, a/b/a; mixed beta-sheet of 8 strands, order 12435678, strand 2 is antiparallel to the rest
Superfamily c.69.1: alpha/beta-Hydrolases [53474] (42 families)
many members have left-handed crossover connection between strand 8 and additional strand 9
Family c.69.1.8: Haloalkane dehalogenase [53513] (2 proteins)
Protein automated matches [190880] (5 species)
not a true protein

Species:

Mycobacterium tuberculosis [TaxId:83332] [188251] (3 PDB entries)
1. Domain for 2o2h:
  - Domain d2o2ha_: 2o2h A: [166504]
    automated match to d1k5pa_
    complexed with act, cl, dce
2. Domain for 2o2i:
  - Domain d2o2ia_: 2o2i A: [166505]
    automated match to d1k5pa_
    complexed with br, pdo
3. Domains for 2qvb:
  1. Domain d2qvba_: 2qvb A: [167832]
    automated match to d1k5pa_
    complexed with cl, edo
  2. Domain d2qvbb_: 2qvb B: [167833]
    automated match to d1k5pa_
    complexed with cl, edo
Rhodococcus rhodochrous [TaxId:1829] [189127] (16 PDB entries)
1. Domain for 2v9z:
  - Domain d2v9za_: 2v9z A: [243854]
    automated match to d3sk0a_
    mutant
2. Domain for 3fbw:
  - Domain d3fbwa1: 3fbw A:3-293 [175665]
    Other proteins in same PDB: d3fbwa2
    automated match to d1bn6a_
    complexed with bez, cl, mg; mutant
3. Domain for 3rk4:
  - Domain d3rk4a1: 3rk4 A:4-293 [195573]
    Other proteins in same PDB: d3rk4a2
    automated match to d3fwha_
    complexed with cl; mutant
4. Domain for 3rlt:
  - Domain d3rlta1: 3rlt A:4-293 [306470]
    Other proteins in same PDB: d3rlta2
    automated match to d4kaja_
    complexed with 3kp, cl; mutant
5. Domain for 3sk0:
  - Domain d3sk0a1: 3sk0 A:4-304 [195037]
    Other proteins in same PDB: d3sk0a2
    automated match to d3fwha_
    complexed with cl; mutant
6. Domain for 4e46:
  - Domain d4e46a1: 4e46 A:4-293 [234359]
    Other proteins in same PDB: d4e46a2
    automated match to d1bn7a_
    complexed with act, cl, ipa
7. Domain for 4f5z:
  - Domain d4f5za1: 4f5z A:4-293 [194087]
    Other proteins in same PDB: d4f5za2
    automated match to d1bn7a_
    complexed with bez, cl; mutant
8. Domain for 4f60:
  - Domain d4f60a_: 4f60 A: [194086]
    automated match to d3fwha_
    complexed with f; mutant
9. Domain for 4fwb:
  - Domain d4fwba1: 4fwb A:4-293 [194732]
    Other proteins in same PDB: d4fwba2
    automated match to d3fwha_
    complexed with 3kp, cl; mutant
10. Domain for 4wcv:
  - Domain d4wcva1: 4wcv A:4-293 [260465]
    Other proteins in same PDB: d4wcva2
    automated match to d4kaja_
    complexed with act, cl, pge; mutant
11. Domain for 5flk:
  - Domain d5flka1: 5flk A:4-293 [332326]
    Other proteins in same PDB: d5flka2
    automated match to d2v9za_
    complexed with mes, peg
12. Domains for 5uxz:
  1. Domain d5uxza1: 5uxz A:4-291 [330921]
    Other proteins in same PDB: d5uxza2, d5uxzb2
    automated match to d1cqwa_
    complexed with 8pm, cl, edo
  2. Domain d5uxzb1: 5uxz B:4-292 [330946]
    Other proteins in same PDB: d5uxza2, d5uxzb2
    automated match to d1cqwa_
    complexed with 8pm, cl, edo
13. Domains for 5uy1:
  1. Domain d5uy1a1: 5uy1 A:4-290 [330942]
    Other proteins in same PDB: d5uy1a2, d5uy1b2
    automated match to d1cqwa_
    complexed with cl, edo
  2. Domain d5uy1b1: 5uy1 B:4-290 [330907]
    Other proteins in same PDB: d5uy1a2, d5uy1b2
    automated match to d1cqwa_
    complexed with cl, edo
14. Domains for 5vnp:
  1. Domain d5vnpa_: 5vnp A: [335476]
    automated match to d1cqwa_
    complexed with 9fm, cl
  2. Domain d5vnpb_: 5vnp B: [335477]
    automated match to d1cqwa_
    complexed with 9fm, cl
15. Domains for 6sp5:
  1. Domain d6sp5a_: 6sp5 A: [395727]
    automated match to d2v9za_
    complexed with b3p, gol, scn
  2. Domain d6sp5b_: 6sp5 B: [395720]
    automated match to d2v9za_
    complexed with b3p, gol, scn
16. Domains for 6sp8:
  1. Domain d6sp8a_: 6sp8 A: [395580]
    automated match to d2v9za_
    complexed with b3p, gol, kr, scn
  2. Domain d6sp8b_: 6sp8 B: [395549]
    automated match to d2v9za_
    complexed with b3p, gol, kr, scn

Rhodococcus sp. [TaxId:1831] [189207] (13 PDB entries)

Domain for 3fwh:
- Domain d3fwha1: 3fwh A:2-293 [176109]
  Other proteins in same PDB: d3fwha2
  automated match to d1bn6a_
  complexed with act, cl, ipa; mutant
Domain for 3g9x:
- Domain d3g9xa1: 3g9x A:4-293 [176457]
  Other proteins in same PDB: d3g9xa2
  automated match to d1bn6a_
  complexed with act, cl, ipa; mutant
Domain for 4hzg:
- Domain d4hzga1: 4hzg A:3-293 [228036]
  Other proteins in same PDB: d4hzga2
  automated match to d4kaja_
  complexed with cl
Domains for 4kaa:
1. Domain d4kaaa1: 4kaa A:13-304 [224233]
  Other proteins in same PDB: d4kaaa2, d4kaab2
  automated match to d4kaca_
  complexed with na, peg
2. Domain d4kaab1: 4kaa B:14-304 [224234]
  Other proteins in same PDB: d4kaaa2, d4kaab2
  automated match to d4kaca_
  complexed with na, peg
Domains for 4kac:
1. Domain d4kaca1: 4kac A:14-304 [197265]
  Other proteins in same PDB: d4kaca2, d4kacb2
  automated match to d1bn7a_
  complexed with 1q9, nh4, pe4
2. Domain d4kacb1: 4kac B:14-304 [202841]
  Other proteins in same PDB: d4kaca2, d4kacb2
  automated match to d4kaca_
  complexed with 1q9, nh4, pe4
Domains for 4kaf:
1. Domain d4kafa1: 4kaf A:13-303 [197267]
  Other proteins in same PDB: d4kafa2, d4kafa3, d4kafb2
  automated match to d3fbwa_
  complexed with edo, na, peg, scn
2. Domain d4kafb1: 4kaf B:-1-303 [202842]
  Other proteins in same PDB: d4kafa2, d4kafa3, d4kafb2
  automated match to d4kafa_
  complexed with edo, na, peg, scn
Domain for 4kaj:
- Domain d4kaja1: 4kaj A:3-293 [197266]
  Other proteins in same PDB: d4kaja2, d4kaja3
  automated match to d3fbwa_
  complexed with 1q9, edo, gol, mn, na
Domain for 5y2x:
- Domain d5y2xa1: 5y2x A:3-293 [338861]
  Other proteins in same PDB: d5y2xa2
  automated match to d2v9za_
  complexed with cl
Domains for 5y2y:
1. Domain d5y2ya_: 5y2y A: [338845]
  Other proteins in same PDB: d5y2yb2
  automated match to d2v9za_
  complexed with 8ll, cl
2. Domain d5y2yb1: 5y2y B:4-293 [338842]
  Other proteins in same PDB: d5y2yb2
  automated match to d2v9za_
  complexed with 8ll, cl
Domain for 6u32:
- Domain d6u32a_: 6u32 A: [392253]
  automated match to d2v9za_
  complexed with cl, pvy
Domain for 6y7a:
- Domain d6y7aa1: 6y7a A:4-293 [402846]
  Other proteins in same PDB: d6y7aa2, d6y7aa3
  automated match to d5vnpa_
  complexed with cl, gol, oeh

Domains for 6y7b:

Domain d6y7ba1: 6y7b A:4-293 [402877]
Other proteins in same PDB: d6y7ba2, d6y7ba3, d6y7bb2, d6y7bb3, d6y7bc2, d6y7bc3, d6y7bd2, d6y7bd3, d6y7be2, d6y7be3
automated match to d5vnpa_
complexed with cl, oek

Domain d6y7bb1: 6y7b B:4-293 [402770]
Other proteins in same PDB: d6y7ba2, d6y7ba3, d6y7bb2, d6y7bb3, d6y7bc2, d6y7bc3, d6y7bd2, d6y7bd3, d6y7be2, d6y7be3
automated match to d5vnpa_
complexed with cl, oek

Domain d6y7bc1: 6y7b C:4-293 [402788]
Other proteins in same PDB: d6y7ba2, d6y7ba3, d6y7bb2, d6y7bb3, d6y7bc2, d6y7bc3, d6y7bd2, d6y7bd3, d6y7be2, d6y7be3
automated match to d5vnpa_
complexed with cl, oek

Domain d6y7bd1: 6y7b D:4-293 [402867]
Other proteins in same PDB: d6y7ba2, d6y7ba3, d6y7bb2, d6y7bb3, d6y7bc2, d6y7bc3, d6y7bd2, d6y7bd3, d6y7be2, d6y7be3
automated match to d5vnpa_
complexed with cl, oek

Domain d6y7be1: 6y7b E:4-293 [402782]
Other proteins in same PDB: d6y7ba2, d6y7ba3, d6y7bb2, d6y7bb3, d6y7bc2, d6y7bc3, d6y7bd2, d6y7bd3, d6y7be2, d6y7be3
automated match to d5vnpa_
complexed with cl, oek

Domain for 6zcc:
- Domain d6zcca1: 6zcc A:4-293 [404297]
  Other proteins in same PDB: d6zcca2
  automated match to d5vnpa_
  complexed with act, ca, oeh

Sphingobium japonicum [TaxId:332056] [323688] (1 PDB entry)
- Domain for 5lka:
  - Domain d5lkaa1: 5lka A:2-296 [323689]
    Other proteins in same PDB: d5lkaa2
    automated match to d2qvba_
    complexed with scn; mutant
Sphingobium japonicum [TaxId:452662] [280072] (2 PDB entries)
1. Domains for 4wdr:
  1. Domain d4wdra_: 4wdr A: [280073]
    automated match to d1k63a_
    complexed with ca, cl; mutant
  2. Domain d4wdrb_: 4wdr B: [280074]
    automated match to d1k63a_
    complexed with ca, cl; mutant
2. Domain for 6s06:
  - Domain d6s06a_: 6s06 A: [389347]
    automated match to d2qvba_
    complexed with cl, mg; mutant

More info for Protein automated matches from c.69.1.8: Haloalkane dehalogenase

Timeline for Protein automated matches from c.69.1.8: Haloalkane dehalogenase:

Protein automated matches from c.69.1.8: Haloalkane dehalogenase first appeared in SCOPe 2.01
Protein automated matches from c.69.1.8: Haloalkane dehalogenase appears in SCOPe 2.06
Protein automated matches from c.69.1.8: Haloalkane dehalogenase appears in the current release, SCOPe 2.08