Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 3012399Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)
  3. 3012400Fold e.1: Serpins [56573] (1 superfamily)
    contains a cluster of helices and a beta-sandwich
  4. 3012401Superfamily e.1.1: Serpins [56574] (2 families) (S)
  5. 3012625Family e.1.1.0: automated matches [191406] (1 protein)
    not a true family
  6. 3012626Protein automated matches [190555] (14 species)
    not a true protein

Species:

  1. 3012627African malaria mosquito (Anopheles gambiae) [TaxId:7165] [226079] (5 PDB entries)
    1. Domain for 3pzf:
    2. Domains for 4ro9:
      1. 3012630Domain d4ro9a_: 4ro9 A: [309480]
        automated match to d3pzfa_
        complexed with gol
      2. 3012631Domain d4ro9b_: 4ro9 B: [309481]
        automated match to d3pzfa_
        complexed with gol
      3. 3012632Domain d4ro9c_: 4ro9 C: [309482]
        automated match to d3pzfa_
        complexed with gol
    3. Domain for 4roa:
    4. Domains for 4rob:
      1. 3012633Domain d4roba_: 4rob A: [268762]
        automated match to d3pzfa_
      2. 3012634Domain d4robb_: 4rob B: [268763]
        automated match to d3pzfa_
      3. 3012635Domain d4robc_: 4rob C: [268761]
        automated match to d3pzfa_
    5. Domains for 4rsq:
      1. 3012636Domain d4rsqa_: 4rsq A: [309528]
        automated match to d3pzfa_
      2. 3012637Domain d4rsqb_: 4rsq B: [309529]
        automated match to d3pzfa_
      3. 3012638Domain d4rsqc_: 4rsq C: [309530]
        automated match to d3pzfa_
      4. 3012639Domain d4rsqd_: 4rsq D: [309531]
        automated match to d3pzfa_
      5. 3012640Domain d4rsqe_: 4rsq E: [309532]
        automated match to d3pzfa_
      6. 3012641Domain d4rsqf_: 4rsq F: [309533]
        automated match to d3pzfa_
      7. 3012642Domain d4rsqg_: 4rsq G: [309534]
        automated match to d3pzfa_
      8. 3012643Domain d4rsqh_: 4rsq H: [309535]
        automated match to d3pzfa_
      9. 3012644Domain d4rsqi_: 4rsq I: [309536]
        automated match to d3pzfa_
      10. 3012645Domain d4rsqj_: 4rsq J: [309537]
        automated match to d3pzfa_
      11. 3012646Domain d4rsqk_: 4rsq K: [309538]
        automated match to d3pzfa_
      12. 3012647Domain d4rsql_: 4rsq L: [309539]
        automated match to d3pzfa_
  2. 3012648Blood fluke (Schistosoma haematobium) [TaxId:6185] [256088] (1 PDB entry)
  3. 3012650Chicken (Gallus gallus) [TaxId:9031] [187788] (1 PDB entry)
  4. 3012652Fruit fly (Drosophila melanogaster) [TaxId:7227] [257383] (2 PDB entries)
    1. Domain for 4p0f:
    2. Domain for 4p0o:
  5. 3012655Human (Homo sapiens) [TaxId:9606] [187538] (16 PDB entries)
    1. Domains for 2ceo:
      1. 3012682Domain d2ceoa_: 2ceo A: [163379]
        automated match to d1qmna_
        complexed with gol, t44
      2. 3012683Domain d2ceob_: 2ceo B: [163380]
        automated match to d1qmna_
        complexed with gol, t44
    2. Domain for 2oay:
    3. Domains for 2vdx:
      1. 3012658Domain d2vdxa_: 2vdx A: [168481]
        automated match to d1oo8a_
        complexed with na
      2. 3012659Domain d2vdxb_: 2vdx B: [168482]
        automated match to d1oo8a_
        complexed with na
    4. Domains for 2vdy:
      1. 3012671Domain d2vdya_: 2vdy A: [168483]
        automated match to d1oo8a_
        complexed with hcy
      2. 3012672Domain d2vdyb_: 2vdy B: [168484]
        automated match to d1oo8a_
        complexed with hcy
    5. Domains for 2zv6:
      1. 3012679Domain d2zv6a_: 2zv6 A: [171543]
        Other proteins in same PDB: d2zv6b2, d2zv6c2
        automated match to d1jtia_
      2. 3012680Domain d2zv6b1: 2zv6 B:2-390 [171544]
        Other proteins in same PDB: d2zv6b2, d2zv6c2
        automated match to d1jtia_
      3. 3012681Domain d2zv6c1: 2zv6 C:2-390 [171545]
        Other proteins in same PDB: d2zv6b2, d2zv6c2
        automated match to d1jtia_
    6. Domain for 3dlw:
    7. Domain for 3f1s:
    8. Domain for 4c41:
    9. Domains for 4c49:
      1. 3012675Domain d4c49a_: 4c49 A: [259750]
        automated match to d2vdxa_
        complexed with hcy
      2. 3012676Domain d4c49b_: 4c49 B: [262549]
        automated match to d4c41a_
        complexed with hcy
      3. 3012677Domain d4c49c_: 4c49 C: [262550]
        automated match to d4c41a_
        complexed with hcy
      4. 3012678Domain d4c49d_: 4c49 D: [262551]
        automated match to d4c41a_
        complexed with hcy
    10. Domains for 4dy0:
      1. 3012662Domain d4dy0a_: 4dy0 A: [201748]
        automated match to d4dy0b_
        complexed with gol, so4
      2. 3012663Domain d4dy0b_: 4dy0 B: [193593]
        automated match to d1lj5a_
        complexed with gol, so4
    11. Domains for 4dy7:
      1. 3012669Domain d4dy7c_: 4dy7 C: [220099]
        automated match to d4dy0b_
        complexed with act, ca, na
      2. 3012670Domain d4dy7f_: 4dy7 F: [220100]
        automated match to d4dy0b_
        complexed with act, ca, na
    12. Domain for 4x30:
    13. Domain for 4zk0:
    14. Domain for 4zk3:
    15. Domains for 5du3:
      1. 3012666Domain d5du3a_: 5du3 A: [321882]
        automated match to d2oaya1
      2. 3012667Domain d5du3b_: 5du3 B: [321885]
        automated match to d2oaya1
    16. Domains for 5duq:
      1. 3012673Domain d5duqa_: 5duq A: [321900]
        automated match to d2oaya1
        complexed with glc, nag, so3
      2. 3012674Domain d5duqb_: 5duq B: [321978]
        automated match to d2oaya1
        complexed with glc, nag, so3
  6. 3012684Ixodes ricinus [TaxId:34613] [196412] (1 PDB entry)
  7. 3012687Mouse (Mus musculus) [TaxId:10090] [226534] (1 PDB entry)
  8. 3012689Norway rat (Rattus norvegicus) [TaxId:10116] [188046] (2 PDB entries)
    1. Domain for 2v6d:
    2. Domain for 2v95:
  9. 3012692Taeniopygia guttata [TaxId:59729] [314903] (1 PDB entry)
  10. 3012694Tannerella forsythia [TaxId:203275] [334639] (1 PDB entry)
  11. 3012697Thale cress (Arabidopsis thaliana) [TaxId:3702] [189243] (1 PDB entry)
  12. 3012699Thermoanaerobacter tengcongensis [TaxId:273068] [225282] (3 PDB entries)
    1. Domains for 2pee:
      1. 3012701Domain d2peea_: 2pee A: [231144]
        automated match to d2pefa_
        complexed with gol, so4
      2. 3012702Domain d2peeb_: 2pee B: [231145]
        automated match to d2pefa_
        complexed with gol, so4
    2. Domain for 2pef:
    3. Domains for 2vh4:
      1. 3012703Domain d2vh4a_: 2vh4 A: [231340]
        automated match to d2pefa_
      2. 3012704Domain d2vh4b_: 2vh4 B: [231339]
        automated match to d2pefa_
  13. 3012705Tobacco hornworm (Manduca sexta) [TaxId:7130] [354211] (1 PDB entry)
  14. 3012707Yellow mealworm (Tenebrio molitor) [TaxId:7067] [226018] (1 PDB entry)

More info for Protein automated matches from e.1.1.0: automated matches

Timeline for Protein automated matches from e.1.1.0: automated matches: