SCOPe 2.06: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.06
Class a: All alpha proteins [46456] (289 folds)
Fold a.21: HMG-box [47094] (1 superfamily)
3 helices; irregular array
Superfamily a.21.1: HMG-box [47095] (2 families)
Family a.21.1.1: HMG-box [47096] (10 proteins)
Protein automated matches [190434] (3 species)
not a true protein

Species:

Fruit fly (Drosophila melanogaster) [TaxId:7227] [189474] (2 PDB entries)
1. Domain for 1wxl:
  - Domain d1wxla1: 1wxl A:5-74 [240928]
    Other proteins in same PDB: d1wxla2
    automated match to d1qrva_
2. Domains for 3nm9:
  1. Domain d3nm9a_: 3nm9 A: [182390]
    automated match to d1e7ja_
    protein/DNA complex
  2. Domain d3nm9d_: 3nm9 D: [182391]
    automated match to d1e7ja_
    protein/DNA complex
  3. Domain d3nm9g_: 3nm9 G: [182392]
    automated match to d1e7ja_
    protein/DNA complex
  4. Domain d3nm9j_: 3nm9 J: [182393]
    automated match to d1e7ja_
    protein/DNA complex
  5. Domain d3nm9m_: 3nm9 M: [182394]
    automated match to d1e7ja_
    protein/DNA complex
  6. Domain d3nm9p_: 3nm9 P: [182395]
    automated match to d1e7ja_
    protein/DNA complex
Human (Homo sapiens) [TaxId:9606] [187328] (5 PDB entries)
1. Domain for 2eqz:
  - Domain d2eqza1: 2eqz A:8-86 [241787]
    Other proteins in same PDB: d2eqza2
    automated match to d1j3xa_
2. Domain for 2hdz:
  - Domain d2hdza_: 2hdz A: [165062]
    automated match to d1l8ya_
3. Domain for 2ly4:
  - Domain d2ly4a_: 2ly4 A: [243032]
    automated match to d1aaba_
    protein/DNA complex
4. Domain for 2rtu:
  - Domain d2rtua1: 2rtu A:4-87 [243773]
    Other proteins in same PDB: d2rtua2
    automated match to d1aaba_
5. Domain for 2yqi:
  - Domain d2yqia1: 2yqi A:8-81 [244799]
    Other proteins in same PDB: d2yqia2
    automated match to d1hsma_
Mouse (Mus musculus) [TaxId:10090] [188832] (3 PDB entries)
1. Domain for 1lef:
  - Domain d1lefa_: 1lef A: [302668]
    automated match to d2lefa_
    protein/DNA complex
2. Domain for 3f27:
  - Domain d3f27d_: 3f27 D: [175425]
    automated match to d1gt0d_
    protein/DNA complex
3. Domain for 3u2b:
  - Domain d3u2bc_: 3u2b C: [186063]
    automated match to d1gt0d_
    protein/DNA complex

More info for Protein automated matches from a.21.1.1: HMG-box

Timeline for Protein automated matches from a.21.1.1: HMG-box:

Protein automated matches from a.21.1.1: HMG-box first appeared in SCOPe 2.01
Protein automated matches from a.21.1.1: HMG-box appears in SCOPe 2.05
Protein automated matches from a.21.1.1: HMG-box appears in SCOPe 2.07
Protein automated matches from a.21.1.1: HMG-box appears in the current release, SCOPe 2.08