Lineage for Family a.21.1.1: HMG-box

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1987159Fold a.21: HMG-box [47094] (1 superfamily)
    3 helices; irregular array
  4. 1987160Superfamily a.21.1: HMG-box [47095] (2 families) (S)
  5. 1987161Family a.21.1.1: HMG-box [47096] (10 proteins)

Proteins:

  1. 1987162High mobility group protein 1, HMG1 [47097] (2 species)
    duplication: contains HMG-box domains
    1. 1987163Species Chinese hamster (Cricetulus griseus) [TaxId:10029] [47099] (5 PDB entries)
    2. 1987169Species Norway rat (Rattus norvegicus) [TaxId:10116] [47098] (4 PDB entries)
  2. 1987174High mobility group protein 2, HMG2 [109762] (1 species)
  3. 1987179HMG-D [47100] (1 species)
  4. 1987185Lymphoid enhancer-binding factor, LEF1 [47110] (1 species)
  5. 1987188NHP6a [47102] (1 species)
  6. 1987193Nucleolar transcription factor 1 (Upstream binding factor 1, UBF-1) [68982] (2 species)
    Contains 6 HMG-box domains
    1. 1987194Species Human (Homo sapiens) [TaxId:9606] [68983] (3 PDB entries)
    2. 1987198Species Mouse (Mus musculus) [TaxId:10090] [109764] (3 PDB entries)
      Uniprot P25976 388-383, 392-470, 567-655
  7. 1987202Sox-2 [81718] (2 species)
    1. 1987203Species Human (Homo sapiens) [TaxId:9606] [101105] (2 PDB entries)
    2. 1987206Species Mouse (Mus musculus) [TaxId:10090] [81719] (1 PDB entry)
  8. 1987208Sox-5 [47106] (1 species)
  9. 1987211SRY [47104] (1 species)
  10. 1987218automated matches [190434] (3 species)
    not a true protein
    1. 1987219Species Fruit fly (Drosophila melanogaster) [TaxId:7227] [189474] (2 PDB entries)
    2. 1987227Species Human (Homo sapiens) [TaxId:9606] [187328] (5 PDB entries)
    3. 1987233Species Mouse (Mus musculus) [TaxId:10090] [188832] (3 PDB entries)

More info for Family a.21.1.1: HMG-box

Timeline for Family a.21.1.1: HMG-box: