SCOPe 2.08: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.08
Class g: Small proteins [56992] (100 folds)
Fold g.17: Cystine-knot cytokines [57500] (1 superfamily)
disulfide-rich fold; common core is all-beta
Superfamily g.17.1: Cystine-knot cytokines [57501] (8 families)
Family g.17.1.3: Neurotrophin [57520] (5 proteins)
automatically mapped to Pfam PF00243
Protein automated matches [190424] (5 species)
not a true protein

Species:

Chinese cobra (Naja atra) [TaxId:8656] [194713] (1 PDB entry)
- Domains for 4ec7:
  1. Domain d4ec7a_: 4ec7 A: [194715]
    automated match to d1wwww_
    complexed with l44
  2. Domain d4ec7b_: 4ec7 B: [194714]
    automated match to d1wwww_
    complexed with l44
Horse (Equus caballus) [TaxId:9796] [379724] (1 PDB entry)
- Domain for 6xuo:
  - Domain d6xuoa_: 6xuo A: [379725]
    automated match to d5lsda_
    complexed with zn
Human (Homo sapiens) [TaxId:9606] [187311] (1 PDB entry)
- Domains for 3buk:
  1. Domain d3buka_: 3buk A: [155610]
    Other proteins in same PDB: d3bukc1, d3bukc2, d3bukc3, d3bukc4, d3bukd1, d3bukd2, d3bukd3, d3bukd4
    automated match to d1nt3a_
    complexed with nag
  2. Domain d3bukb_: 3buk B: [155611]
    Other proteins in same PDB: d3bukc1, d3bukc2, d3bukc3, d3bukc4, d3bukd1, d3bukd2, d3bukd3, d3bukd4
    automated match to d1nt3a_
    complexed with nag
Llama (Lama glama) [TaxId:9844] [194795] (1 PDB entry)
- Domains for 4efv:
  1. Domain d4efva_: 4efv A: [194797]
    automated match to d1wwww_
    complexed with cl, po4
  2. Domain d4efvb_: 4efv B: [194796]
    automated match to d1wwww_
    complexed with cl, po4
Mouse (Mus musculus) [TaxId:10090] [193171] (2 PDB entries)
1. Domains for 4eax:
  1. Domain d4eaxa_: 4eax A: [193172]
    automated match to d1sgfy_
    complexed with s12
  2. Domain d4eaxb_: 4eax B: [201822]
    automated match to d4eaxa_
    complexed with s12
  3. Domain d4eaxc_: 4eax C: [201823]
    automated match to d4eaxa_
    complexed with s12
  4. Domain d4eaxd_: 4eax D: [201824]
    automated match to d4eaxa_
    complexed with s12
2. Domains for 4xpj:
  1. Domain d4xpja_: 4xpj A: [275058]
    automated match to d1wwww_
    complexed with lpy
  2. Domain d4xpjb_: 4xpj B: [275059]
    automated match to d1wwww_
    complexed with lpy

More info for Protein automated matches from g.17.1.3: Neurotrophin

Timeline for Protein automated matches from g.17.1.3: Neurotrophin:

Protein automated matches from g.17.1.3: Neurotrophin first appeared in SCOPe 2.01
Protein automated matches from g.17.1.3: Neurotrophin appears in SCOPe 2.07