Lineage for Species: Mouse (Mus musculus) [TaxId: 10090]

  1. Root: SCOPe 2.08
  2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. Fold d.15: beta-Grasp (ubiquitin-like) [54235] (15 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. Protein Ubiquitin [54238] (9 species)
  7. Species Mouse (Mus musculus) [TaxId:10090] [190020] (14 PDB entries)

PDB entries in Species: Mouse (Mus musculus) [TaxId: 10090]:

  1. Domain(s) for 2znv:
    1. Domain d2znvc_: 2znv C: [154708]
      Other proteins in same PDB: d2znva_, d2znvb_, d2znvd_, d2znve_
      automated match to d1aara_
      complexed with edo, zn
    2. Domain d2znvf_: 2znv F: [154710]
      Other proteins in same PDB: d2znva_, d2znvb_, d2znvd_, d2znve_
      automated match to d1aara_
      complexed with edo, zn
  2. Domain(s) for 3a1q:
    1. Domain d3a1qa_: 3a1q A: [171640]
      automated match to d1aara_
    2. Domain d3a1qb_: 3a1q B: [171641]
      automated match to d1aara_
    3. Domain d3a1qd_: 3a1q D: [171642]
      automated match to d1aara_
    4. Domain d3a1qe_: 3a1q E: [171643]
      automated match to d1aara_
  3. Domain(s) for 3a9j:
    1. Domain d3a9ja_: 3a9j A: [171886]
      automated match to d1aara_
      complexed with zn
    2. Domain d3a9jb_: 3a9j B: [171887]
      automated match to d1aara_
      complexed with zn
  4. Domain(s) for 3a9k:
    1. Domain d3a9ka_: 3a9k A: [171888]
      automated match to d1aara_
      complexed with zn
    2. Domain d3a9kb_: 3a9k B: [171889]
      automated match to d1aara_
      complexed with zn
  5. Domain(s) for 3vht:
  6. Domain(s) for 3wwq:
    1. Domain d3wwqa_: 3wwq A: [272751]
      automated match to d3dvgy_
      protein/DNA complex; complexed with zn
    2. Domain d3wwqb_: 3wwq B: [272753]
      automated match to d3jsvb_
      protein/DNA complex; complexed with zn
    3. Domain d3wwqd_: 3wwq D: [272754]
      automated match to d3dvgy_
      protein/DNA complex; complexed with zn
    4. Domain d3wwqe_: 3wwq E: [272756]
      automated match to d3jsvb_
      protein/DNA complex; complexed with zn
    5. Domain d3wwqg_: 3wwq G: [272755]
      automated match to d3dvgy_
      protein/DNA complex; complexed with zn
    6. Domain d3wwqh_: 3wwq H: [272752]
      automated match to d3jsvb_
      protein/DNA complex; complexed with zn
    7. Domain d3wwqj_: 3wwq J: [272757]
      automated match to d3dvgy_
      protein/DNA complex; complexed with zn
    8. Domain d3wwqk_: 3wwq K: [272758]
      automated match to d3jsvb_
      protein/DNA complex; complexed with zn
  7. Domain(s) for 3wxg:
    1. Domain d3wxgb_: 3wxg B: [306931]
      automated match to d3wwqa_
    2. Domain d3wxgc_: 3wxg C: [306932]
      automated match to d3rula_
    3. Domain d3wxge_: 3wxg E: [306933]
      automated match to d3wwqa_
    4. Domain d3wxgf_: 3wxg F: [306934]
      automated match to d3rula_
  8. Domain(s) for 4nql:
  9. Domain(s) for 5gvi:
    1. Domain d5gvib_: 5gvi B: [338887]
      automated match to d2k39a_
      complexed with zn
    2. Domain d5gvic_: 5gvi C: [338899]
      automated match to d3rula_
      complexed with zn
  10. Domain(s) for 5xis:
    1. Domain d5xisb_: 5xis B: [348672]
      automated match to d3jsvb_
      complexed with mg, xyz
    2. Domain d5xisc_: 5xis C: [348543]
      automated match to d3dvgy_
      complexed with mg, xyz
    3. Domain d5xise_: 5xis E: [348548]
      automated match to d3jsvb_
      complexed with mg, xyz
    4. Domain d5xisf_: 5xis F: [348718]
      automated match to d3dvgy_
      complexed with mg, xyz
  11. Domain(s) for 5xit:
    1. Domain d5xitb_: 5xit B: [348556]
      automated match to d3jsvb_
      protein/DNA complex; complexed with gol, pr
    2. Domain d5xitd_: 5xit D: [348584]
      automated match to d3dvgy_
      protein/DNA complex; complexed with gol, pr
    3. Domain d5xitf_: 5xit F: [348647]
      automated match to d3dvgy_
      protein/DNA complex; complexed with gol, pr
    4. Domain d5xith_: 5xit H: [348610]
      automated match to d3jsvb_
      protein/DNA complex; complexed with gol, pr
  12. Domain(s) for 5xiu:
  13. Domain(s) for 6jwi:
    1. Domain d6jwig_: 6jwi G: [378556]
      automated match to d1ogwa_
      complexed with bcn, zn
    2. Domain d6jwii_: 6jwi I: [378555]
      automated match to d1ogwa_
      complexed with bcn, zn
  14. Domain(s) for 6n5m:
    1. Domain d6n5ma1: 6n5m A:0-76 [370720]
      Other proteins in same PDB: d6n5ma3
      automated match to d4k1rb_
    2. Domain d6n5ma2: 6n5m A:77-149 [370721]
      Other proteins in same PDB: d6n5ma3
      automated match to d4k1rb_

More info for Species Mouse (Mus musculus) [TaxId:10090] from d.15.1.1 Ubiquitin

Timeline for Species Mouse (Mus musculus) [TaxId:10090] from d.15.1.1 Ubiquitin: