SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Mouse (Mus musculus) [TaxId: 10090]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2158219Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2158220Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2158221Family d.15.1.1: Ubiquitin-related [54237] (39 protein domains)
    Pfam PF00240
  6. 2158454Protein Ubiquitin [54238] (7 species)
  7. 2158857Species Mouse (Mus musculus) [TaxId:10090] [190020] (9 PDB entries)

PDB entries in Species: Mouse (Mus musculus) [TaxId: 10090]:

  1. Domain(s) for 2n13:
  2. Domain(s) for 2znv:
    1. 2158862Domain d2znvc_: 2znv C: [154708]
      Other proteins in same PDB: d2znva_, d2znvb_, d2znvd_, d2znve_
      automated match to d1aara_
      complexed with edo, zn
    2. 2158863Domain d2znvf_: 2znv F: [154710]
      Other proteins in same PDB: d2znva_, d2znvb_, d2znvd_, d2znve_
      automated match to d1aara_
      complexed with edo, zn
  3. Domain(s) for 3a1q:
    1. 2158864Domain d3a1qa_: 3a1q A: [171640]
      automated match to d1aara_
    2. 2158865Domain d3a1qb_: 3a1q B: [171641]
      automated match to d1aara_
    3. 2158866Domain d3a1qd_: 3a1q D: [171642]
      automated match to d1aara_
    4. 2158867Domain d3a1qe_: 3a1q E: [171643]
      automated match to d1aara_
  4. Domain(s) for 3a9j:
    1. 2158858Domain d3a9ja_: 3a9j A: [171886]
      automated match to d1aara_
      complexed with zn
    2. 2158859Domain d3a9jb_: 3a9j B: [171887]
      automated match to d1aara_
      complexed with zn
  5. Domain(s) for 3a9k:
    1. 2158860Domain d3a9ka_: 3a9k A: [171888]
      automated match to d1aara_
      complexed with zn
    2. 2158861Domain d3a9kb_: 3a9k B: [171889]
      automated match to d1aara_
      complexed with zn
  6. Domain(s) for 3vht:
  7. Domain(s) for 3wwq:
    1. 2158868Domain d3wwqa_: 3wwq A: [272751]
      automated match to d3dvgy_
      protein/DNA complex; complexed with zn
    2. 2158869Domain d3wwqb_: 3wwq B: [272753]
      automated match to d3jsvb_
      protein/DNA complex; complexed with zn
    3. 2158870Domain d3wwqd_: 3wwq D: [272754]
      automated match to d3dvgy_
      protein/DNA complex; complexed with zn
    4. 2158871Domain d3wwqe_: 3wwq E: [272756]
      automated match to d3jsvb_
      protein/DNA complex; complexed with zn
    5. 2158872Domain d3wwqg_: 3wwq G: [272755]
      automated match to d3dvgy_
      protein/DNA complex; complexed with zn
    6. 2158873Domain d3wwqh_: 3wwq H: [272752]
      automated match to d3jsvb_
      protein/DNA complex; complexed with zn
    7. 2158874Domain d3wwqj_: 3wwq J: [272757]
      automated match to d3dvgy_
      protein/DNA complex; complexed with zn
    8. 2158875Domain d3wwqk_: 3wwq K: [272758]
      automated match to d3jsvb_
      protein/DNA complex; complexed with zn
  8. Domain(s) for 3wxg:
    1. 2158878Domain d3wxgb_: 3wxg B: [306931]
      automated match to d3wwqa_
    2. 2158879Domain d3wxgc_: 3wxg C: [306932]
      automated match to d3rula_
    3. 2158880Domain d3wxge_: 3wxg E: [306933]
      automated match to d3wwqa_
    4. 2158881Domain d3wxgf_: 3wxg F: [306934]
      automated match to d3rula_
  9. Domain(s) for 4nql:

More info for Species Mouse (Mus musculus) [TaxId:10090] from d.15.1.1 Ubiquitin

Timeline for Species Mouse (Mus musculus) [TaxId:10090] from d.15.1.1 Ubiquitin: