SCOPe 2.08: Protein: TRAPPC5, similar to trafficking protein particle complex 5

Lineage for Protein: TRAPPC5, similar to trafficking protein particle complex 5

Root: SCOPe 2.08
Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

Fold d.278: Ligand-binding domain in the NO signalling and Golgi transport [111125] (1 superfamily)
an N-terminal helical bundle and the C-terminal alpha-beta(2)-alpha-beta(2) subdomain enclose a ligand-binding cavity

Superfamily d.278.1: Ligand-binding domain in the NO signalling and Golgi transport [111126] (4 families)

Family d.278.1.2: TRAPP components [118076] (3 proteins)
Pfam PF04051; form homo- and hetero-dimers with the first two helices of one subunit complementing the fold of the other subunit to the H-NOX domain fold

Protein TRAPPC5, similar to trafficking protein particle complex 5 [160687] (1 species)

Species:

Zebrafish (Danio rerio) [TaxId:7955] [160688] (1 PDB entry)
Uniprot Q6DGL5 21-188
- Domains for 2j3w:
  1. Domain d2j3wb1: 2j3w B:21-188 [145643]
    Other proteins in same PDB: d2j3wa_, d2j3wc_, d2j3wd_, d2j3we_
    complexed with plm
  2. Domain d2j3wf_: 2j3w F: [145644]
    Other proteins in same PDB: d2j3wa_, d2j3wc_, d2j3wd_, d2j3we_
    automated match to d2j3wb1
    complexed with plm

More info for Protein TRAPPC5, similar to trafficking protein particle complex 5 from d.278.1.2: TRAPP components

Timeline for Protein TRAPPC5, similar to trafficking protein particle complex 5 from d.278.1.2: TRAPP components:

Protein TRAPPC5, similar to trafficking protein particle complex 5 from d.278.1.2: TRAPP components first appeared in SCOP 1.75
Protein TRAPPC5, similar to trafficking protein particle complex 5 from d.278.1.2: TRAPP components appears in SCOPe 2.07