SCOPe 2.08: Domain d2vutf_: 2vut F:

Lineage for d2vutf_ (2vut F:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.2: Tyrosine-dependent oxidoreductases [51751] (73 proteins)
   also known as short-chain dehydrogenases and SDR family
   parallel beta-sheet is extended by 7th strand, order 3214567; left-handed crossover connection between strands 6 and 7
   has additional subdomain(s) that are not in the common domain
   

6. Protein automated matches [190085] (59 species)
   not a true protein

7. Species Emericella nidulans [TaxId:162425] [187249] (3 PDB entries)

8. Domain d2vutf_: 2vut F: [153578]
   Other proteins in same PDB: d2vuti_, d2vutj_, d2vutk_, d2vutl_, d2vutm_, d2vutn_, d2vuto_, d2vutp_
   automated match to d1k6jb_
   protein/DNA complex; complexed with cl, gol, nad, zn

Details for d2vutf_

PDB Entry: 2vut, 2.3 Å

PDB Description: crystal structure of nad-bound nmra-area zinc finger complex

PDB Compounds: (F:) nitrogen metabolite repression regulator nmra

SCOPe Domain Sequences for d2vutf_:

Sequence, based on SEQRES records:

>d2vutf_ c.2.1.2 (F:) automated matches {Emericella nidulans [TaxId: 162425]}
qqkktiavvnatgrqaaslirvaaavghhvraqvhslkgliaeelqaipnvtlfqgplln
nvplmdtlfegahlafinttsqagdeiaigkdladaakragtiqhyiyssmpdhslygpw
pavpmwapkftvenyvrqlglpstfvyagiynnnftslpyplfqmelmpdgtfewhapfd
pdiplpwldaehdvgpallqifkdgpqkwnghrialtfetlspvqvcaafsralnrrvty
vqvpkveikvnipvgyreqleaievvfgehkapyfplpefsrpaagspkglgpangkgag
agmmqgpggvisqrvtdearklwsgwrdmeeyarevfpieeeangldwml

Sequence, based on observed residues (ATOM records):

>d2vutf_ c.2.1.2 (F:) automated matches {Emericella nidulans [TaxId: 162425]}
qqkktiavvnatgrqaaslirvaaavghhvraqvhslkgliaeelqaipnvtlfqgplln
nvplmdtlfegahlafinttsqagdeiaigkdladaakragtiqhyiyssmpdhslygpw
pavpmwapkftvenyvrqlglpstfvyagiynnnftslpyplfqmelmpdgtfewhapfd
pdiplpwldaehdvgpallqifkdgpqkwnghrialtfetlspvqvcaafsralnrrvty
vqvpkveikvnipvgyreqleaievvfgehkapyfplpefsrvtdearklwsgwrdmeey
arevfpieeeangldwml

Timeline for d2vutf_:

• d2vutf_ first appeared in SCOP 1.75, called d2vutf1
  
• d2vutf_ appears in SCOPe 2.07