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Lineage for d2vhmv1 (2vhm V:1-94)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2061452Fold b.53: Ribosomal protein L25-like [50714] (1 superfamily)
    barrel, closed; n=6, S=10; complex topology
  4. 2061453Superfamily b.53.1: Ribosomal protein L25-like [50715] (3 families) (S)
  5. 2061454Family b.53.1.1: Ribosomal protein L25-like [50716] (2 protein domains)
  6. 2061455Protein Ribosomal protein L25 [50717] (1 species)
  7. 2061456Species Escherichia coli [TaxId:562] [50718] (32 PDB entries)
  8. 2061480Domain d2vhmv1: 2vhm V:1-94 [153085]
    Other proteins in same PDB: d2vhm01, d2vhm11, d2vhm31, d2vhm41, d2vhmc1, d2vhmc2, d2vhmd1, d2vhme1, d2vhmf1, d2vhmg1, d2vhmg2, d2vhmh1, d2vhmh2, d2vhmi1, d2vhmi2, d2vhmj1, d2vhmk1, d2vhml1, d2vhmm1, d2vhmn1, d2vhmo1, d2vhmp1, d2vhmq1, d2vhmr1, d2vhms1, d2vhmt1, d2vhmu1, d2vhmw1, d2vhmx1, d2vhmy1, d2vhmz1
    protein/RNA complex; complexed with mg
    protein/RNA complex; complexed with mg

Details for d2vhmv1

PDB Entry: 2vhm (more details), 3.74 Å

PDB Description: Structure of PDF binding helix in complex with the ribosome
PDB Compounds: (V:) 50S ribosomal protein L25

SCOPe Domain Sequences for d2vhmv1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2vhmv1 b.53.1.1 (V:1-94) Ribosomal protein L25 {Escherichia coli [TaxId: 562]}
mftinaevrkeqgkgasrrlraankfpaiiyggkeaplaieldhdkvmnmqakaefysev
ltivvdgkeikvkaqdvqrhpykpklqhidfvra

SCOPe Domain Coordinates for d2vhmv1:

Click to download the PDB-style file with coordinates for d2vhmv1.
(The format of our PDB-style files is described here.)

Timeline for d2vhmv1: