SCOPe 2.08: Domain d2guba_: 2gub A:

Lineage for d2guba_ (2gub A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.15: Xylose isomerase-like [51658] (8 families)
   different families share similar but non-identical metal-binding sites

5. Family c.1.15.3: Xylose isomerase [51665] (2 proteins)

6. Protein automated matches [190298] (3 species)
   not a true protein

7. Species Streptomyces rubiginosus [TaxId:1929] [187248] (20 PDB entries)

8. Domain d2guba_: 2gub A: [135729]
   automated match to d1dxia_

Details for d2guba_

PDB Entry: 2gub, 1.8 Å

PDB Description: Crystal Structure of Metal Free D-Xylose Isomerase.

PDB Compounds: (A:) xylose isomerase

SCOPe Domain Sequences for d2guba_:

Sequence; same for both SEQRES and ATOM records:

>d2guba_ c.1.15.3 (A:) automated matches {Streptomyces rubiginosus [TaxId: 1929]}
yqptpedrftfglwtvgwqgrdpfgdatrraldpvesvrrlaelgahgvtfhdddlipfg
ssdsereehvkrfrqalddtgmkvpmattnlfthpvfkdggftandrdvrryalrktirn
idlavelgaetyvawggregaesggakdvrdaldrmkeafdllgeyvtsqgydirfaiep
kpneprgdillptvghalafierlerpelygvnpevgheqmaglnfphgiaqalwagklf
hidlngqngikydqdlrfgagdlraafwlvdllesagysgprhfdfkpprtedfdgvwas
aagcmrnylilkeraaafradpevqealrasrldelarptaadglqallddrsafeefdv
daaaargmaferldqlamdhllgar

Timeline for d2guba_:

• d2guba_ first appeared in SCOP 1.73, called d2guba1
  
• d2guba_ appears in SCOPe 2.07