Lineage for Family c.1.15.3: Xylose isomerase

  1. Root: SCOPe 2.08
  2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily c.1.15: Xylose isomerase-like [51658] (8 families) (S)
    different families share similar but non-identical metal-binding sites
  5. Family c.1.15.3: Xylose isomerase [51665] (2 proteins)

Proteins:

  1. D-xylose isomerase [51666] (13 species)
    1. Species Actinoplanes missouriensis [TaxId:1866] [51673] (14 PDB entries)
    2. Species Arthrobacter, strain b3728 [TaxId:1663] [51672] (17 PDB entries)
    3. Species Bacillus stearothermophilus [TaxId:1422] [51675] (1 PDB entry)
    4. Species Clostridium thermosulfurogenes, also known as Thermoanaerobacter thermosulfurigenes [TaxId:33950] [51674] (1 PDB entry)
    5. Species Streptomyces albus [TaxId:1888] [51667] (1 PDB entry)
    6. Species Streptomyces diastaticus, M1033 [TaxId:1956] [51671] (2 PDB entries)
    7. Species Streptomyces murinus [TaxId:33900] [51668] (1 PDB entry)
    8. Species Streptomyces olivochromogenes [TaxId:1963] [51669] (9 PDB entries)
    9. Species Streptomyces rubiginosus [TaxId:1929] [51670] (89 PDB entries)
    10. Species Streptomyces sp. [TaxId:253732] [196714] (2 PDB entries)
    11. Species Thermotoga neapolitana [TaxId:2337] [51676] (1 PDB entry)
    12. Species Thermus aquaticus, subsp. Caldophilus [TaxId:271] [51677] (1 PDB entry)
    13. Species Thermus aquaticus, subsp. Thermophilus [TaxId:271] [51678] (1 PDB entry)
  2. automated matches [190298] (3 species)
    not a true protein
    1. Species Paenibacillus sp. [TaxId:1079050] [362188] (1 PDB entry)
    2. Species Streptomyces rubiginosus [TaxId:1929] [187248] (17 PDB entries)
    3. Species Streptomyces sp. [TaxId:463642] [377717] (2 PDB entries)

More info for Family c.1.15.3: Xylose isomerase

Timeline for Family c.1.15.3: Xylose isomerase: