Structural Classification of Proteins and ASTRAL release 1.75B (January 2013)
Search SCOP (example):

Lineage for Superfamily c.1.15: Xylose isomerase-like

  1. Root: SCOP 1.75B
  2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily c.1.15: Xylose isomerase-like [51658] (8 families) (S)
    different families share similar but non-identical metal-binding sites

Families:

  1. c.1.15.1: Endonuclease IV [51659] (2 protein domains)
  2. c.1.15.2: L-rhamnose isomerase [51662] (2 protein domains)
  3. c.1.15.3: Xylose isomerase [51665] (2 protein domains)
  4. c.1.15.4: IolI-like [75090] (3 protein domains)
  5. c.1.15.5: Hypothetical protein YgbM (EC1530) [75093] (1 protein)
  6. c.1.15.6: UxuA-like [110377] (1 protein)
    Pfam PF03786
  7. c.1.15.7: KguE-like [141854] (1 protein)
    part of Pfam PF01261
  8. c.1.15.0: automated matches [191634] (1 protein)
    not a true family

More info for Superfamily c.1.15: Xylose isomerase-like

Timeline for Superfamily c.1.15: Xylose isomerase-like:

Superfamily c.1.15: Xylose isomerase-like appears in SCOP 1.75A


SCOP Copyright © 1994-2013 The SCOP and Astral authors
scop@mrc-lmb.cam.ac.uk and astral@compbio.berkeley.edu