SCOP 1.73: Domain d2guba1: 2gub A:3-387

Lineage for d2guba1 (2gub A:3-387)

1. Root: SCOP 1.73

2. Class c: Alpha and beta proteins (a/b) [51349] (141 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.15: Xylose isomerase-like [51658] (7 families)
   different families share similar but non-identical metal-binding sites

5. Family c.1.15.3: Xylose isomerase [51665] (1 protein)

6. Protein D-xylose isomerase [51666] (12 species)

7. Species Streptomyces rubiginosus [TaxId:1929] [51670] (23 PDB entries)

8. Domain d2guba1: 2gub A:3-387 [135729]
   automatically matched to d1mnza_

Details for d2guba1

PDB Entry: 2gub, 1.8 Å

PDB Description: Crystal Structure of Metal Free D-Xylose Isomerase.

PDB Compounds: (A:) xylose isomerase

SCOP Domain Sequences for d2guba1:

Sequence; same for both SEQRES and ATOM records:

>d2guba1 c.1.15.3 (A:3-387) D-xylose isomerase {Streptomyces rubiginosus [TaxId: 1929]}
yqptpedrftfglwtvgwqgrdpfgdatrraldpvesvrrlaelgahgvtfhdddlipfg
ssdsereehvkrfrqalddtgmkvpmattnlfthpvfkdggftandrdvrryalrktirn
idlavelgaetyvawggregaesggakdvrdaldrmkeafdllgeyvtsqgydirfaiep
kpneprgdillptvghalafierlerpelygvnpevgheqmaglnfphgiaqalwagklf
hidlngqngikydqdlrfgagdlraafwlvdllesagysgprhfdfkpprtedfdgvwas
aagcmrnylilkeraaafradpevqealrasrldelarptaadglqallddrsafeefdv
daaaargmaferldqlamdhllgar

Timeline for d2guba1:

• d2guba1 is new in SCOP 1.73
  
• d2guba1 appears in SCOP 1.75
  
• d2guba1 appears in the current release, SCOPe 2.08, called d2guba_