Lineage for d2e2ie1 (2e2i E:3-143)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2121131Fold c.52: Restriction endonuclease-like [52979] (4 superfamilies)
    core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest
  4. 2121717Superfamily c.52.3: Eukaryotic RPB5 N-terminal domain [53036] (1 family) (S)
  5. 2121718Family c.52.3.1: Eukaryotic RPB5 N-terminal domain [53037] (2 protein domains)
  6. 2121719Protein Eukaryotic RPB5 N-terminal domain [53038] (2 species)
  7. 2121720Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [53039] (26 PDB entries)
    Uniprot P20434; part of multichain biological unit
  8. 2121735Domain d2e2ie1: 2e2i E:3-143 [131998]
    Other proteins in same PDB: d2e2ia1, d2e2ib1, d2e2ic1, d2e2ic2, d2e2ie2, d2e2if1, d2e2ih1, d2e2ii1, d2e2ii2, d2e2ij1, d2e2ik1, d2e2il1
    automatically matched to d1i3qe1
    protein/DNA complex; protein/RNA complex; complexed with dgt, mg, zn

Details for d2e2ie1

PDB Entry: 2e2i (more details), 3.41 Å

PDB Description: RNA polymerase II elongation complex in 5 mM Mg+2 with 2'-dGTP
PDB Compounds: (E:) DNA-directed RNA polymerases I, II, and III 27 kDa polypeptide

SCOPe Domain Sequences for d2e2ie1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2e2ie1 c.52.3.1 (E:3-143) Eukaryotic RPB5 N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

SCOPe Domain Coordinates for d2e2ie1:

Click to download the PDB-style file with coordinates for d2e2ie1.
(The format of our PDB-style files is described here.)

Timeline for d2e2ie1: