SCOPe 2.08: Domain d1w36d1: 1w36 D:2-360

Lineage for d1w36d1 (1w36 D:2-360)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (27 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.19: Tandem AAA-ATPase domain [81268] (41 proteins)
   duplication: tandem repeat of two RecA-like (AAA) domains

6. Protein Exodeoxyribonuclease V alpha chain (RecD), N-terminal domain [418966] (1 species)
   contains extra N-terminal alpha+beta (sub)domain (~100 residues)

7. Species Escherichia coli [TaxId:562] [419428] (1 PDB entry)
   Uniprot P04993

8. Domain d1w36d1: 1w36 D:2-360 [114128]
   Other proteins in same PDB: d1w36b1, d1w36b2, d1w36b3, d1w36c1, d1w36c2, d1w36c3, d1w36d2, d1w36e1, d1w36e2, d1w36e3, d1w36f1, d1w36f2, d1w36f3, d1w36g2
   protein/DNA complex; complexed with ca
   has additional subdomain(s) that are not in the common domain

Details for d1w36d1

PDB Entry: 1w36, 3.1 Å

PDB Description: recbcd:dna complex

PDB Compounds: (D:) exodeoxyribonuclease v alpha chain

SCOPe Domain Sequences for d1w36d1:

Sequence, based on SEQRES records:

>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD), N-terminal domain {Escherichia coli [TaxId: 562]}
klqkqlleavehkqlrpldvqfaltvagdehpavtlaaallshdageghvclplsrlenn
eashpllatcvseigelqnweecllasqavsrgdeptpmilcgdrlylnrmwcnertvar
ffnevnhaievdeallaqtldklfpvsdeinwqkvaaavaltrrisvisggpgtgktttv
akllaaliqmadgercrirlaaptgkaaarlteslgkalrqlpltdeqkkripedastlh
rllgaqpgsqrlrhhagnplhldvlvvdeasmidlpmmsrlidalpdharviflgdrdql
asveagavlgdicayanagftaerarqlsrltgthvpagtgteaaslrdslcllqksyr

Sequence, based on observed residues (ATOM records):

>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD), N-terminal domain {Escherichia coli [TaxId: 562]}
klqkqlleavehkqlrpldvqfaltvagdehpavtlaaallshdageghvclplsrlenn
eashpllatcvseigelqnweecllasqavsrgdeptpmilcgdrlylnrmwcnertvar
ffnevnhaievdeallaqtldklfpvsdeinwqkvaaavaltrrisvisggpgtgktttv
akllaaliqmadgercrirlaaptgkaaarlteslgkalrqlpltdeqkkripedastlh
rllhagnplhldvlvvdeasmidlpmmsrlidalpdharviflgdrdqlasveagavlgd
icayanagftaerarqlsrltgthvpagtgteaaslrdslcllqksyr

Timeline for d1w36d1:

• d1w36d1 first appeared in SCOP 1.71
  
• d1w36d1 appears in SCOPe 2.07