PDB entry 1w36

View 1w36 on RCSB PDB site
Description: recbcd:DNA complex
Class: recombination
Keywords: recombination, helicase, nuclease, hydrolase, DNA repair
Deposited on 2004-07-13, released 2004-11-04
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: 0.242
AEROSPACI score: 0.14 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'B':
    Compound: exodeoxyribonuclease v beta chain
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1w36b1, d1w36b2, d1w36b3
  • Chain 'C':
    Compound: exodeoxyribonuclease v gamma chain
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1w36c1, d1w36c2, d1w36c3
  • Chain 'D':
    Compound: exodeoxyribonuclease v alpha chain
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1w36d1, d1w36d2
  • Chain 'E':
    Compound: exodeoxyribonuclease v beta chain
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1w36e1, d1w36e2, d1w36e3
  • Chain 'F':
    Compound: exodeoxyribonuclease v gamma chain
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1w36f1, d1w36f2, d1w36f3
  • Chain 'G':
    Compound: exodeoxyribonuclease v alpha chain
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1w36g1, d1w36g2
  • Chain 'Y':
    Compound: DNA hairpin
  • Chain 'Z':
    Compound: DNA hairpin
  • Heterogens: CA

PDB Chain Sequences:

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1w36B (B:)
msdvaetldplrlplqgerlieasagtgktftiaalylrlllglggsaafprpltveell
vvtfteaataelrgrirsnihelriaclrettdnplyerlleeiddkaqaaqwlllaerq
mdeaavftihgfcqrmlnlnafesgmlfeqqliedesllryqacadfwrrhcyplpreia
qvvfetwkgpqallrdinrylqgeapvikapppddetlasrhaqivaridtvkqqwrdav
geldaliessgidrrkfnrsnqakwidkisawaeeetnsyqlpeslekfsqrfledrtka
ggetprhplfeaidqllaeplsirdlvitralaeiretvarekrrrgelgfddmlsrlds
alrsesgevlaaairtrfpvamidefqdtdpqqyrifrriwhhqpetallligdpkqaiy
afrgadiftymkarsevhahytldtnwrsapgmvnsvnklfsqtddafmfreipfipvks
agknqalrfvfkgetqpamkmwlmegescgvgdyqstmaqvcaaqirdwlqagqrgeall
mngddarpvrasdisvlvrsrqeaaqvrdaltlleipsvylsnrdsvfetleaqemlwll
qavmtperentlrsalatsmmglnaldietlnndehawdvvveefdgyrqiwrkrgvmpm
lralmsarniaenllataggerrltdilhisellqeagtqlesehalvrwlsqhilepds
nassqqmrlesdkhlvqivtihkskgleyplvwlpfitnfrvqeqafyhdrhsfeavldl
naapesvdlaeaerlaedlrllyvaltrsvwhcslgvaplvrrrgdkkgdtdvhqsalgr
llqkgepqdaaglrtciealcdddiawqtaqtgdnqpwqvndvstaelnaktlqrlpgdn
wrvtsysglqqrghgiaqdlmprldvdaagvasvveeptltphqfprgaspgtflhslfe
dldftqpvdpnwvreklelggfesqwepvltewitavlqaplnetgvslsqlsarnkqve
mefylpisepliasqldtlirqfdplsagcpplefmqvrgmlkgfidlvfrhegryylld
yksnwlgedssaytqqamaaamqahrydlqyqlytlalhrylrhriadydyehhfggviy
lflrgvdkehpqqgiyttrpnaglialmdemfagmtleea

    Sequence, based on observed residues (ATOM records): (download) 
    >1w36B (B:)
msdvaetldplrlplqgerlieasagtgktftiaalylrlllglggsaafprpltveell
vvtfteaataelrgrirsnihelriaclrettdnplyerlleeiddkaqaaqwlllaerq
mdeaavftihgfcqrmlnlnafesgmlfeqqliedesllryqacadfwrrhcyplpreia
qvvfetwkgpqallrdinrylqgeapvikapppddetlasrhaqivaridtvkqqwrdav
geldaliessgidrrkfnrsnqakwidkisawaeeetnsyqlpeslekprhplfeaidql
laeplsirdlvitralaeiretvarekrrrgelgfddmlsrldsalrsesgevlaaairt
rfpvamidefqdtdpqqyrifrriwhhqpetallligdpkqaiyafrgadiftymkarse
vhahytldtnwrsapgmvnsvnklfsqtddafmfreipfipvksagknqalrfvfkgetq
pamkmwlmegescgvgdyqstmaqvcaaqirdwlqagqrgeallmngddarpvrasdisv
lvrsrqeaaqvrdaltlleipsvylsnrdsvfetleaqemlwllqavmtperentlrsal
atsmmglnaldietlnndehawdvvveefdgyrqiwrkrgvmpmlralmsarniaenlla
taggerrltdilhisellqeagtqlesehalvrwlsqhilepdsnassqqmrlesdkhlv
qivtihkskgleyplvwlpfitnfrvqeqafyhdrhsfeavldlnaapesvdlaeaerla
edlrllyvaltrsvwhcslgvaplvrrrgdkkgdtdvhqsalgrllqkgepqdaaglrtc
iealcdddiawqtaqtgdnqpwqvndvstaelnaktlqrlpgdnwrvtsysglqqrghgi
aqdlmprldvdaagvasvveeptltphqfprgaspgtflhslfedldftqpvdpnwvrek
lelggfesqwepvltewitavlqaplnetgvslsqlsarnkqvemefylpisepliasql
dtlirqfdplsagcpplefmqvrgmlkgfidlvfrhegryylldyksnwlgedssaytqq
amaaamqahrydlqyqlytlalhrylrhriadydyehhfggviylflrgvdkehpqqgiy
ttrpnaglialmdemfag

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1w36C (C:)
mlrvyhsnrldvlealmefivererlddpfepemilvqstgmaqwlqmtlsqkfgiaani
dfplpasfiwdmfvrvlpeipkesafnkqsmswklmtllpqlleredftllrhyltddsd
krklfqlsskaadlfdqylvyrpdwlaqwetghlveglgeaqawqaplwkalveythqlg
qprwhranlyqrfietlesattcppglpsrvficgisalppvylqalqalgkhieihllf
tnpcryywgdikdpaylaklltrqrrhsfedrelplfrdsenagqlfnsdgeqdvgnpll
aswgklgrdyiyllsdlessqeldafvdvtpdnllhniqsdilelenravagvnieefsr
sdnkrpldpldssitfhvchspqrevevlhdrllamleedptltprdiivmvadidsysp
fiqavfgsapadrylpyaisdrrarqshpvleafisllslpdsrfvsedvlalldvpvla
arfditeeglrylrqwvnesgirwgidddnvrelelpatgqhtwrfgltrmllgyamesa
qgewqsvlpydessgliaelvghlasllmqlniwrrglaqerpleewlpvcrdmlnaffl
pdaeteaamtlieqqwqaiiaeglgaqygdavplsllrdelaqrldqerisqrflagpvn
ictlmpmrsipfkvvcllgmndgvyprqlaplgfdlmsqkpkrgdrsrrdddrylfleal
isaqqklyisyigrsiqdnserfpsvlvqelidyigqshylpgdealncdesearvkahl
tclhtrmpfdpqnyqpgerqsyarewlpaasqagkahsefvqplpftlpetvpletlqrf
wahpvraffqmrlqvnfrtedseipdtepfileglsryqinqqllnalveqddaerlfrr
fraagdlpygafgeifwetqcqemqqladrviacrqpgqsmeidlacngvqitgwlpqvq
pdgllrwrpsllsvaqgmqlwlehlvycasggngesrlflrkdgewrfpplaaeqalhyl
sqliegyregmsapllvlpesggawlktcydaqndamldddstlqkartkflqayegnmm
vrgegddiwyqrlwrqltpetmeaiveqsqrfllplfrfnqs

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1w36D (D:)
mklqkqlleavehkqlrpldvqfaltvagdehpavtlaaallshdageghvclplsrlen
neashpllatcvseigelqnweecllasqavsrgdeptpmilcgdrlylnrmwcnertva
rffnevnhaievdeallaqtldklfpvsdeinwqkvaaavaltrrisvisggpgtgkttt
vakllaaliqmadgercrirlaaptgkaaarlteslgkalrqlpltdeqkkripedastl
hrllgaqpgsqrlrhhagnplhldvlvvdeasmidlpmmsrlidalpdharviflgdrdq
lasveagavlgdicayanagftaerarqlsrltgthvpagtgteaaslrdslcllqksyr
fgsdsgigqlaaainrgdktavktvfqqdftdiekrllqsgedyiamleealagygryld
llqaraepdliiqafneyqllcalregpfgvaglnerieqfmqqkrkihrhphsrwyegr
pvmiarndsalglfngdigialdrgqgtrvwfampdgniksvqpsrlpehettwamtvhk
sqgsefdhaalilpsqrtpvvtrelvytavtrarrrlslyaderilsaaiatrterrsgl
aalfssre

    Sequence, based on observed residues (ATOM records): (download) 
    >1w36D (D:)
klqkqlleavehkqlrpldvqfaltvagdehpavtlaaallshdageghvclplsrlenn
eashpllatcvseigelqnweecllasqavsrgdeptpmilcgdrlylnrmwcnertvar
ffnevnhaievdeallaqtldklfpvsdeinwqkvaaavaltrrisvisggpgtgktttv
akllaaliqmadgercrirlaaptgkaaarlteslgkalrqlpltdeqkkripedastlh
rllhagnplhldvlvvdeasmidlpmmsrlidalpdharviflgdrdqlasveagavlgd
icayanagftaerarqlsrltgthvpagtgteaaslrdslcllqksyrfgsdsgigqlaa
ainrgdktavktvfqqdftdiekrllqsgedyiamleealagygryldllqaraepdlii
qafneyqllcalregpfgvaglnerieqfmqqkrqpsrlpehettwamtvhksqgsefdh
aalilpsqrtpvvtrelvytavtrarrrlslyaderilsaaiatrterrsglaalfssr

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >1w36E (E:)
msdvaetldplrlplqgerlieasagtgktftiaalylrlllglggsaafprpltveell
vvtfteaataelrgrirsnihelriaclrettdnplyerlleeiddkaqaaqwlllaerq
mdeaavftihgfcqrmlnlnafesgmlfeqqliedesllryqacadfwrrhcyplpreia
qvvfetwkgpqallrdinrylqgeapvikapppddetlasrhaqivaridtvkqqwrdav
geldaliessgidrrkfnrsnqakwidkisawaeeetnsyqlpeslekfsqrfledrtka
ggetprhplfeaidqllaeplsirdlvitralaeiretvarekrrrgelgfddmlsrlds
alrsesgevlaaairtrfpvamidefqdtdpqqyrifrriwhhqpetallligdpkqaiy
afrgadiftymkarsevhahytldtnwrsapgmvnsvnklfsqtddafmfreipfipvks
agknqalrfvfkgetqpamkmwlmegescgvgdyqstmaqvcaaqirdwlqagqrgeall
mngddarpvrasdisvlvrsrqeaaqvrdaltlleipsvylsnrdsvfetleaqemlwll
qavmtperentlrsalatsmmglnaldietlnndehawdvvveefdgyrqiwrkrgvmpm
lralmsarniaenllataggerrltdilhisellqeagtqlesehalvrwlsqhilepds
nassqqmrlesdkhlvqivtihkskgleyplvwlpfitnfrvqeqafyhdrhsfeavldl
naapesvdlaeaerlaedlrllyvaltrsvwhcslgvaplvrrrgdkkgdtdvhqsalgr
llqkgepqdaaglrtciealcdddiawqtaqtgdnqpwqvndvstaelnaktlqrlpgdn
wrvtsysglqqrghgiaqdlmprldvdaagvasvveeptltphqfprgaspgtflhslfe
dldftqpvdpnwvreklelggfesqwepvltewitavlqaplnetgvslsqlsarnkqve
mefylpisepliasqldtlirqfdplsagcpplefmqvrgmlkgfidlvfrhegryylld
yksnwlgedssaytqqamaaamqahrydlqyqlytlalhrylrhriadydyehhfggviy
lflrgvdkehpqqgiyttrpnaglialmdemfagmtleea

    Sequence, based on observed residues (ATOM records): (download) 
    >1w36E (E:)
msdvaetldplrlplqgerlieasagtgktftiaalylrlllglggsaafprpltveell
vvtfteaataelrgrirsnihelriaclrettdnplyerlleeiddkaqaaqwlllaerq
mdeaavftihgfcqrmlnlnafesgmlfeqqliedesllryqacadfwrrhcyplpreia
qvvfetwkgpqallrdinrylqgeapvikapppddetlasrhaqivaridtvkqqwrdav
geldaliessgidrrkfnrsnqakwidkisawaeeetnsyqlpeslekprhplfeaidql
laeplsirdlvitralaeiretvarekrrrgelgfddmlsrldsalrsesgevlaaairt
rfpvamidefqdtdpqqyrifrriwhhqpetallligdpkqaiyafrgadiftymkarse
vhahytldtnwrsapgmvnsvnklfsqtddafmfreipfipvksagknqalrfvfkgetq
pamkmwlmegescgvgdyqstmaqvcaaqirdwlqagqrgeallmngddarpvrasdisv
lvrsrqeaaqvrdaltlleipsvylsnrdsvfetleaqemlwllqavmtperentlrsal
atsmmglnaldietlnndehawdvvveefdgyrqiwrkrgvmpmlralmsarniaenlla
taggerrltdilhisellqeagtqlesehalvrwlsqhilepdsnassqqmrlesdkhlv
qivtihkskgleyplvwlpfitnfrvqeqafyhdrhsfeavldlnaapesvdlaeaerla
edlrllyvaltrsvwhcslgvaplvrrrgdkkgdtdvhqsalgrllqkgepqdaaglrtc
iealcdddiawqtaqtgdnqpwqvndvstaelnaktlqrlpgdnwrvtsysglqqrghgi
aqdlmprldvdaagvasvveeptltphqfprgaspgtflhslfedldftqpvdpnwvrek
lelggfesqwepvltewitavlqaplnetgvslsqlsarnkqvemefylpisepliasql
dtlirqfdplsagcpplefmqvrgmlkgfidlvfrhegryylldyksnwlgedssaytqq
amaaamqahrydlqyqlytlalhrylrhriadydyehhfggviylflrgvdkehpqqgiy
ttrpnaglialmdemfag

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >1w36F (F:)
mlrvyhsnrldvlealmefivererlddpfepemilvqstgmaqwlqmtlsqkfgiaani
dfplpasfiwdmfvrvlpeipkesafnkqsmswklmtllpqlleredftllrhyltddsd
krklfqlsskaadlfdqylvyrpdwlaqwetghlveglgeaqawqaplwkalveythqlg
qprwhranlyqrfietlesattcppglpsrvficgisalppvylqalqalgkhieihllf
tnpcryywgdikdpaylaklltrqrrhsfedrelplfrdsenagqlfnsdgeqdvgnpll
aswgklgrdyiyllsdlessqeldafvdvtpdnllhniqsdilelenravagvnieefsr
sdnkrpldpldssitfhvchspqrevevlhdrllamleedptltprdiivmvadidsysp
fiqavfgsapadrylpyaisdrrarqshpvleafisllslpdsrfvsedvlalldvpvla
arfditeeglrylrqwvnesgirwgidddnvrelelpatgqhtwrfgltrmllgyamesa
qgewqsvlpydessgliaelvghlasllmqlniwrrglaqerpleewlpvcrdmlnaffl
pdaeteaamtlieqqwqaiiaeglgaqygdavplsllrdelaqrldqerisqrflagpvn
ictlmpmrsipfkvvcllgmndgvyprqlaplgfdlmsqkpkrgdrsrrdddrylfleal
isaqqklyisyigrsiqdnserfpsvlvqelidyigqshylpgdealncdesearvkahl
tclhtrmpfdpqnyqpgerqsyarewlpaasqagkahsefvqplpftlpetvpletlqrf
wahpvraffqmrlqvnfrtedseipdtepfileglsryqinqqllnalveqddaerlfrr
fraagdlpygafgeifwetqcqemqqladrviacrqpgqsmeidlacngvqitgwlpqvq
pdgllrwrpsllsvaqgmqlwlehlvycasggngesrlflrkdgewrfpplaaeqalhyl
sqliegyregmsapllvlpesggawlktcydaqndamldddstlqkartkflqayegnmm
vrgegddiwyqrlwrqltpetmeaiveqsqrfllplfrfnqs

    Sequence, based on observed residues (ATOM records): (download) 
    >1w36F (F:)
mlrvyhsnrldvlealmefivererlddpfepemilvqstgmaqwlqmtlsqkfgiaani
dfplpasfiwdmfvrvlpeipkesafnkqsmswklmtllpqlleredftllrhyltddsd
krklfqlsskaadlfdqylvyrpdwlaqwetghlveglgeaqawqaplwkalveythqlg
qprwhranlyqrfietlesattcppglpsrvficgisalppvylqalqalgkhieihllf
tnpcryywgdvgnpllaswgklgrdyiyllsdlessqeldafvdvtpdnllhniqsdile
lenravagvnieefsrsdnkrpldpldssitfhvchspqrevevlhdrllamleedptlt
prdiivmvadidsyspfiqavfgsapadrylpyaisdrrarqshpvleafisllslpdsr
fvsedvlalldvpvlaarfditeeglrylrqwvnesgirwgidddnvrelelpatgqhtw
rfgltrmllgyamesaqgewqsvlpydessgliaelvghlasllmqlniwrrglaqerpl
eewlpvcrdmlnafflpdaeteaamtlieqqwqaiiaeglgaqygdavplsllrdelaqr
ldqerisqrflagpvnictlmpmrsipfkvvcllgmndgvyprqlaplgfdlmsqkpkrg
drsrrdddrylflealisaqqklyisyigrsiqdnserfpsvlvqelidyigqshylpgd
ealncdesearvkahltclhtrmpfdpqnyqpgerqsyarewlpaasqagkahsefvqpl
pftlpetvpletlqrfwahpvraffqmrlqvnfrtedseipdtepfileglsryqinqql
lnalveqddaerlfrrfraagdlpygafgeifwetqcqemqqladrviacrqpgqsmeid
lacngvqitgwlpqvqpdgllrwrpsllsvaqgmqlwlehlvycasggngesrlflrkdg
ewrfpplaaeqalhylsqliegyregmsapllvlpesggawlktcydaqndamldddstl
qkartkflqayegnmmvrgegddiwyqrlwrqltpetmeaiveqsqrfllplfrfnqs

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >1w36G (G:)
mklqkqlleavehkqlrpldvqfaltvagdehpavtlaaallshdageghvclplsrlen
neashpllatcvseigelqnweecllasqavsrgdeptpmilcgdrlylnrmwcnertva
rffnevnhaievdeallaqtldklfpvsdeinwqkvaaavaltrrisvisggpgtgkttt
vakllaaliqmadgercrirlaaptgkaaarlteslgkalrqlpltdeqkkripedastl
hrllgaqpgsqrlrhhagnplhldvlvvdeasmidlpmmsrlidalpdharviflgdrdq
lasveagavlgdicayanagftaerarqlsrltgthvpagtgteaaslrdslcllqksyr
fgsdsgigqlaaainrgdktavktvfqqdftdiekrllqsgedyiamleealagygryld
llqaraepdliiqafneyqllcalregpfgvaglnerieqfmqqkrkihrhphsrwyegr
pvmiarndsalglfngdigialdrgqgtrvwfampdgniksvqpsrlpehettwamtvhk
sqgsefdhaalilpsqrtpvvtrelvytavtrarrrlslyaderilsaaiatrterrsgl
aalfssre

    Sequence, based on observed residues (ATOM records): (download) 
    >1w36G (G:)
klqkqlleavehkqlrpldvqfaltvagdehpavtlaaallshdageghvclplsrlenn
eashpllatcvseigelqnweecllasqavsrgdeptpmilcgdrlylnrmwcnertvar
ffnevnhaievdeallaqtldklfpvsdeinwqkvaaavaltrrisvisggpgtgktttv
akllaaliqmadgercrirlaaptgkaaarlteslgkalrqlpltdeqkkripedastlh
rllhagnplhldvlvvdeasmidlpmmsrlidalpdharviflgdrdqlasveagavlgd
icayanagftaerarqlsrltgthvpagtgteaaslrdslcllqksyrfgsdsgigqlaa
ainrgdktavktvfqqdftdiekrllqsgedyiamleealagygryldllqaraepdlii
qafneyqllcalregpfgvaglnerieqfmqqkrqpsrlpehettwamtvhksqgsefdh
aalilpsqrtpvvtrelvytavtrarrrlslyaderilsaaiatrterrsglaalfssr

  • Chain 'Y':
    No sequence available.

  • Chain 'Z':
    No sequence available.