SCOPe 2.06: Protein: N-acylamino acid racemase

Lineage for Protein: N-acylamino acid racemase

Root: SCOPe 2.06
Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
Fold d.54: Enolase N-terminal domain-like [54825] (1 superfamily)
beta(3)-alpha(3); meander and up-and-down bundle
Superfamily d.54.1: Enolase N-terminal domain-like [54826] (2 families)
Family d.54.1.1: Enolase N-terminal domain-like [54827] (15 proteins)
C-terminal domain is beta/alpha-barrel
Protein N-acylamino acid racemase [110937] (4 species)

Species:

Amycolatopsis sp. [TaxId:37632] [110938] (4 PDB entries)
Uniprot Q44244; similar activity to a remotely related O-succinylbenzoate synthase from E. coli
1. Domains for 1sja:
  1. Domain d1sjaa2: 1sja A:1-125 [105609]
    Other proteins in same PDB: d1sjaa1, d1sjab1, d1sjac1, d1sjad1
    complexed with ame, mg
  2. Domain d1sjab2: 1sja B:1-125 [105611]
    Other proteins in same PDB: d1sjaa1, d1sjab1, d1sjac1, d1sjad1
    complexed with ame, mg
  3. Domain d1sjac2: 1sja C:1-125 [105613]
    Other proteins in same PDB: d1sjaa1, d1sjab1, d1sjac1, d1sjad1
    complexed with ame, mg
  4. Domain d1sjad2: 1sja D:1-125 [105615]
    Other proteins in same PDB: d1sjaa1, d1sjab1, d1sjac1, d1sjad1
    complexed with ame, mg
2. Domains for 1sjb:
  1. Domain d1sjba2: 1sjb A:1-125 [105617]
    Other proteins in same PDB: d1sjba1, d1sjbb1, d1sjbc1, d1sjbd1
    complexed with mg, osb
  2. Domain d1sjbb2: 1sjb B:1-125 [105619]
    Other proteins in same PDB: d1sjba1, d1sjbb1, d1sjbc1, d1sjbd1
    complexed with mg, osb
  3. Domain d1sjbc2: 1sjb C:1-125 [105621]
    Other proteins in same PDB: d1sjba1, d1sjbb1, d1sjbc1, d1sjbd1
    complexed with mg, osb
  4. Domain d1sjbd2: 1sjb D:1-125 [105623]
    Other proteins in same PDB: d1sjba1, d1sjbb1, d1sjbc1, d1sjbd1
    complexed with mg, osb
3. Domains for 1sjc:
  1. Domain d1sjca2: 1sjc A:1-125 [105625]
    Other proteins in same PDB: d1sjca1, d1sjcb1, d1sjcc1, d1sjcd1
    complexed with mg, smg
  2. Domain d1sjcb2: 1sjc B:1-125 [105627]
    Other proteins in same PDB: d1sjca1, d1sjcb1, d1sjcc1, d1sjcd1
    complexed with mg, smg
  3. Domain d1sjcc2: 1sjc C:1-125 [105629]
    Other proteins in same PDB: d1sjca1, d1sjcb1, d1sjcc1, d1sjcd1
    complexed with mg, smg
  4. Domain d1sjcd2: 1sjc D:1-125 [105631]
    Other proteins in same PDB: d1sjca1, d1sjcb1, d1sjcc1, d1sjcd1
    complexed with mg, smg
4. Domains for 1sjd:
  1. Domain d1sjda2: 1sjd A:1-125 [105633]
    Other proteins in same PDB: d1sjda1, d1sjdb1, d1sjdc1, d1sjdd1
    complexed with npg
  2. Domain d1sjdb2: 1sjd B:1-125 [105635]
    Other proteins in same PDB: d1sjda1, d1sjdb1, d1sjdc1, d1sjdd1
    complexed with npg
  3. Domain d1sjdc2: 1sjd C:1-125 [105637]
    Other proteins in same PDB: d1sjda1, d1sjdb1, d1sjdc1, d1sjdd1
    complexed with npg
  4. Domain d1sjdd2: 1sjd D:1-125 [105639]
    Other proteins in same PDB: d1sjda1, d1sjdb1, d1sjdc1, d1sjdd1
    complexed with npg
Deinococcus radiodurans [TaxId:1299] [110939] (5 PDB entries)
Uniprot Q9RYA6
1. Domains for 1r0m:
  1. Domain d1r0ma2: 1r0m A:6-132 [104748]
    Other proteins in same PDB: d1r0ma1, d1r0mb1, d1r0mc1, d1r0md1
  2. Domain d1r0mb2: 1r0m B:6-132 [104750]
    Other proteins in same PDB: d1r0ma1, d1r0mb1, d1r0mc1, d1r0md1
  3. Domain d1r0mc2: 1r0m C:6-132 [104752]
    Other proteins in same PDB: d1r0ma1, d1r0mb1, d1r0mc1, d1r0md1
  4. Domain d1r0md2: 1r0m D:6-132 [104754]
    Other proteins in same PDB: d1r0ma1, d1r0mb1, d1r0mc1, d1r0md1
2. Domains for 1xpy:
  1. Domain d1xpya2: 1xpy A:6-132 [115811]
    Other proteins in same PDB: d1xpya1, d1xpyb1, d1xpyc1, d1xpyd1
    complexed with mg, nlq
  2. Domain d1xpyb2: 1xpy B:6-132 [115813]
    Other proteins in same PDB: d1xpya1, d1xpyb1, d1xpyc1, d1xpyd1
    complexed with mg, nlq
  3. Domain d1xpyc2: 1xpy C:6-132 [115815]
    Other proteins in same PDB: d1xpya1, d1xpyb1, d1xpyc1, d1xpyd1
    complexed with mg, nlq
  4. Domain d1xpyd2: 1xpy D:6-132 [115817]
    Other proteins in same PDB: d1xpya1, d1xpyb1, d1xpyc1, d1xpyd1
    complexed with mg, nlq
3. Domains for 1xs2:
  1. Domain d1xs2a2: 1xs2 A:6-132 [115899]
    Other proteins in same PDB: d1xs2a1, d1xs2b1, d1xs2c1, d1xs2d1
    complexed with mg
  2. Domain d1xs2b2: 1xs2 B:6-132 [115901]
    Other proteins in same PDB: d1xs2a1, d1xs2b1, d1xs2c1, d1xs2d1
    complexed with mg
  3. Domain d1xs2c2: 1xs2 C:6-132 [115903]
    Other proteins in same PDB: d1xs2a1, d1xs2b1, d1xs2c1, d1xs2d1
    complexed with mg
  4. Domain d1xs2d2: 1xs2 D:6-132 [115905]
    Other proteins in same PDB: d1xs2a1, d1xs2b1, d1xs2c1, d1xs2d1
    complexed with mg
4. Domains for 2bah:
  1. Domain d2baha1: 2bah A:6-132 [303566]
    Other proteins in same PDB: d2baha2, d2bahb2, d2bahc2, d2bahd2
    automated match to d2fkpa2
    mutant
  2. Domain d2bahb1: 2bah B:6-132 [303568]
    Other proteins in same PDB: d2baha2, d2bahb2, d2bahc2, d2bahd2
    automated match to d2fkpa2
    mutant
  3. Domain d2bahc1: 2bah C:6-132 [303570]
    Other proteins in same PDB: d2baha2, d2bahb2, d2bahc2, d2bahd2
    automated match to d2fkpa2
    mutant
  4. Domain d2bahd1: 2bah D:6-132 [303572]
    Other proteins in same PDB: d2baha2, d2bahb2, d2bahc2, d2bahd2
    automated match to d2fkpa2
    mutant
5. Domains for 2fkp:
  1. Domain d2fkpa2: 2fkp A:6-132 [133666]
    Other proteins in same PDB: d2fkpa1, d2fkpb2, d2fkpc2, d2fkpd2
    mutant
  2. Domain d2fkpb1: 2fkp B:6-132 [197919]
    Other proteins in same PDB: d2fkpa1, d2fkpb2, d2fkpc2, d2fkpd2
    automated match to d2fkpa2
    mutant
  3. Domain d2fkpc1: 2fkp C:6-132 [197921]
    Other proteins in same PDB: d2fkpa1, d2fkpb2, d2fkpc2, d2fkpd2
    automated match to d2fkpa2
    mutant
  4. Domain d2fkpd1: 2fkp D:6-132 [197923]
    Other proteins in same PDB: d2fkpa1, d2fkpb2, d2fkpc2, d2fkpd2
    automated match to d2fkpa2
    mutant
Enterococcus faecalis [TaxId:1351] [117925] (1 PDB entry)
Uniprot Q838J7; EF0450; protein assignment by sequence similarity
- Domains for 1wue:
  1. Domain d1wuea2: 1wue A:1001-1126 [114893]
    Other proteins in same PDB: d1wuea1, d1wuea3, d1wueb1, d1wueb3
    Structural genomics target
  2. Domain d1wueb2: 1wue B:2001-2126 [114895]
    Other proteins in same PDB: d1wuea1, d1wuea3, d1wueb1, d1wueb3
    Structural genomics target
Listeria innocua [TaxId:1642] [117926] (1 PDB entry)
Uniprot Q927X3; Lin2664; protein assignment by sequence similarity
- Domains for 1wuf:
  1. Domain d1wufa2: 1wuf A:1001-1126 [114897]
    Other proteins in same PDB: d1wufa1, d1wufa3, d1wufb1, d1wufb3
    Structural genomics target
    complexed with mg
  2. Domain d1wufb2: 1wuf B:2001-2126 [114899]
    Other proteins in same PDB: d1wufa1, d1wufa3, d1wufb1, d1wufb3
    Structural genomics target
    complexed with mg

More info for Protein N-acylamino acid racemase from d.54.1.1: Enolase N-terminal domain-like

Timeline for Protein N-acylamino acid racemase from d.54.1.1: Enolase N-terminal domain-like:

Protein N-acylamino acid racemase from d.54.1.1: Enolase N-terminal domain-like first appeared in SCOP 1.69
Protein N-acylamino acid racemase from d.54.1.1: Enolase N-terminal domain-like appears in SCOPe 2.05
Protein N-acylamino acid racemase from d.54.1.1: Enolase N-terminal domain-like appears in SCOPe 2.07
Protein N-acylamino acid racemase from d.54.1.1: Enolase N-terminal domain-like appears in the current release, SCOPe 2.08