Lineage for d1tufb2 (1tuf B:50-313)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2080829Superfamily c.1.6: PLP-binding barrel [51419] (2 families) (S)
    circular permutation of the canonical fold: begins with an alpha helix and ends with a beta-strand
  5. 2080830Family c.1.6.1: Alanine racemase-like, N-terminal domain [51420] (4 protein domains)
  6. 2080865Protein Diaminopimelate decarboxylase LysA [89457] (3 species)
    most similar to eukaryotic ODC
  7. 2080869Species Methanococcus jannaschii [TaxId:2190] [110347] (2 PDB entries)
    Uniprot Q58497
  8. 2080875Domain d1tufb2: 1tuf B:50-313 [107338]
    Other proteins in same PDB: d1tufa1, d1tufb1
    Structural genomics target
    complexed with az1

Details for d1tufb2

PDB Entry: 1tuf (more details), 2.4 Å

PDB Description: Crystal structure of Diaminopimelate Decarboxylase from m. jannaschi
PDB Compounds: (B:) diaminopimelate decarboxylase

SCOPe Domain Sequences for d1tufb2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1tufb2 c.1.6.1 (B:50-313) Diaminopimelate decarboxylase LysA {Methanococcus jannaschii [TaxId: 2190]}

SCOPe Domain Coordinates for d1tufb2:

Click to download the PDB-style file with coordinates for d1tufb2.
(The format of our PDB-style files is described here.)

Timeline for d1tufb2:

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Domains from same chain:
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