Lineage for d1tufb2 (1tuf B:50-313)

  1. Root: SCOP 1.69
  2. 473232Class c: Alpha and beta proteins (a/b) [51349] (136 folds)
  3. 473233Fold c.1: TIM beta/alpha-barrel [51350] (31 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 473860Superfamily c.1.6: PLP-binding barrel [51419] (2 families) (S)
    circular permutation of the canonical fold: begins with an alpha helix and ends with a beta-strand
  5. 473861Family c.1.6.1: Alanine racemase-like, N-terminal domain [51420] (3 proteins)
  6. 473888Protein Diaminopimelate decarboxylase LysA [89457] (3 species)
    most similar to eukaryotic ODC
  7. 473889Species Archaeon Methanococcus jannaschii [TaxId:2190] [110347] (2 PDB entries)
  8. 473895Domain d1tufb2: 1tuf B:50-313 [107338]
    Other proteins in same PDB: d1tufa1, d1tufb1
    Structural genomics target

Details for d1tufb2

PDB Entry: 1tuf (more details), 2.4 Å

PDB Description: crystal structure of diaminopimelate decarboxylase from m. jannaschi

SCOP Domain Sequences for d1tufb2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1tufb2 c.1.6.1 (B:50-313) Diaminopimelate decarboxylase LysA {Archaeon Methanococcus jannaschii}

SCOP Domain Coordinates for d1tufb2:

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Timeline for d1tufb2:

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Domains from same chain:
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