Lineage for Species: Methanococcus jannaschii [TaxId: 2190]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2080829Superfamily c.1.6: PLP-binding barrel [51419] (2 families) (S)
    circular permutation of the canonical fold: begins with an alpha helix and ends with a beta-strand
  5. 2080830Family c.1.6.1: Alanine racemase-like, N-terminal domain [51420] (4 protein domains)
  6. 2080865Protein Diaminopimelate decarboxylase LysA [89457] (3 species)
    most similar to eukaryotic ODC
  7. 2080869Species Methanococcus jannaschii [TaxId:2190] [110347] (2 PDB entries)
    Uniprot Q58497

PDB entries in Species: Methanococcus jannaschii [TaxId: 2190]:

  1. Domain(s) for 1tuf:
    1. 2080874Domain d1tufa2: 1tuf A:50-313 [107336]
      Other proteins in same PDB: d1tufa1, d1tufb1
      Structural genomics target
      complexed with az1
    2. 2080875Domain d1tufb2: 1tuf B:50-313 [107338]
      Other proteins in same PDB: d1tufa1, d1tufb1
      Structural genomics target
      complexed with az1
  2. Domain(s) for 1twi:
    1. 2080870Domain d1twia2: 1twi A:50-313 [107400]
      Other proteins in same PDB: d1twia1, d1twib1, d1twic1, d1twid1
      Structural genomics target
      complexed with lys, mg, plp
    2. 2080871Domain d1twib2: 1twi B:50-313 [107402]
      Other proteins in same PDB: d1twia1, d1twib1, d1twic1, d1twid1
      Structural genomics target
      complexed with lys, mg, plp
    3. 2080872Domain d1twic2: 1twi C:50-313 [107404]
      Other proteins in same PDB: d1twia1, d1twib1, d1twic1, d1twid1
      Structural genomics target
      complexed with lys, mg, plp
    4. 2080873Domain d1twid2: 1twi D:50-313 [107406]
      Other proteins in same PDB: d1twia1, d1twib1, d1twic1, d1twid1
      Structural genomics target
      complexed with lys, mg, plp

More info for Species Methanococcus jannaschii [TaxId:2190] from c.1.6.1 Diaminopimelate decarboxylase LysA

Timeline for Species Methanococcus jannaschii [TaxId:2190] from c.1.6.1 Diaminopimelate decarboxylase LysA: