PDB entry 6zlf

View 6zlf on RCSB PDB site
Description: Aerobic crystal structure of F420H2-Oxidase from Methanothermococcus thermolithotrophicus at 1.8A resolution under 125 bars of krypton
Class: oxidoreductase
Keywords: Krypton derivatization, oxidase, O2, OXIDOREDUCTASE
Deposited on 2020-06-30, released 2020-11-25
The last revision prior to the SCOPe 2.07 freeze date was dated 2020-11-25, with a file datestamp of 2020-11-20.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Coenzyme F420H2 oxidase (FprA)
    Species: Methanothermococcus thermolithotrophicus [TaxId:2186]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6zlfa1, d6zlfa2
  • Chain 'F':
    Compound: Coenzyme F420H2 oxidase (FprA)
    Species: Methanothermococcus thermolithotrophicus [TaxId:2186]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6zlff1, d6zlff2
  • Chain 'G':
    Compound: Coenzyme F420H2 oxidase (FprA)
    Species: Methanothermococcus thermolithotrophicus [TaxId:2186]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6zlfg1, d6zlfg2
  • Chain 'H':
    Compound: Coenzyme F420H2 oxidase (FprA)
    Species: Methanothermococcus thermolithotrophicus [TaxId:2186]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6zlfh1, d6zlfh2
  • Chain 'I':
    Compound: Coenzyme F420H2 oxidase (FprA)
    Species: Methanothermococcus thermolithotrophicus [TaxId:2186]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6zlfi1, d6zlfi2
  • Chain 'J':
    Compound: Coenzyme F420H2 oxidase (FprA)
    Species: Methanothermococcus thermolithotrophicus [TaxId:2186]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6zlfj1, d6zlfj2
  • Chain 'K':
    Compound: Coenzyme F420H2 oxidase (FprA)
    Species: Methanothermococcus thermolithotrophicus [TaxId:2186]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6zlfk1, d6zlfk2
  • Chain 'L':
    Compound: Coenzyme F420H2 oxidase (FprA)
    Species: Methanothermococcus thermolithotrophicus [TaxId:2186]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6zlfl1, d6zlfl2
  • Heterogens: HEZ, FEO, KR, FMN, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6zlfA (A:)
mkadavkiadgvywvgvldwdirmyhgytlngttynaylvfgddkvalidntypgtsaqm
wgrikdacekegrefkidvivqnhvekdhsgalpeihkkfpeapiyctevaveglvkhfp
slkgapfkvvkslesidlggktltfleapllhwpdsmftlyaeegilfsndafgqhlcft
qrfdheipenilmdanqkfyanlitplsklvlkkfkevielgllekikmiapshgqiwtd
pmkvigayqdfatgkckdkvtivydtmhgstqkmahafaegimsegvdvkmyflhnders
eivkdildskafllgaptiydepfpsvgdliyylkglkfnrtglkrlalafgsmggnggg
tkvlaeklkecgfevldeyelyyvptedelekcynmgkrlavkvkemkte

    Sequence, based on observed residues (ATOM records): (download) 
    >6zlfA (A:)
mkadavkiadgvywvgvldwdirmyhgytlngttynaylvfgddkvalidntypgtsaqm
wgrikdacekegrefkidvivqnhvekdhsgalpeihkkfpeapiyctevaveglvkhfp
slkgapfkvvkslesidlggktltfleapllhwpdsmftlyaeegilfsndafgqhlcft
qrfdheipenilmdanqkfyanlitplsklvlkkfkevielgllekikmiapshgqiwtd
pmkvigayqdfatgkckdkvtivydtmhgstqkmahafaegimsegvdvkmyflhnders
eivkdildskafllgaptiydepfpsvgdliyylkglkfnrtglkrlalafgsmggnggg
tkvlaeklkecgfevldeyelyyvptedelekcynmgkrlavkvkemkt

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >6zlfF (F:)
mkadavkiadgvywvgvldwdirmyhgytlngttynaylvfgddkvalidntypgtsaqm
wgrikdacekegrefkidvivqnhvekdhsgalpeihkkfpeapiyctevaveglvkhfp
slkgapfkvvkslesidlggktltfleapllhwpdsmftlyaeegilfsndafgqhlcft
qrfdheipenilmdanqkfyanlitplsklvlkkfkevielgllekikmiapshgqiwtd
pmkvigayqdfatgkckdkvtivydtmhgstqkmahafaegimsegvdvkmyflhnders
eivkdildskafllgaptiydepfpsvgdliyylkglkfnrtglkrlalafgsmggnggg
tkvlaeklkecgfevldeyelyyvptedelekcynmgkrlavkvkemkte

    Sequence, based on observed residues (ATOM records): (download) 
    >6zlfF (F:)
mkadavkiadgvywvgvldwdirmyhgytlngttynaylvfgddkvalidntypgtsaqm
wgrikdacekegrefkidvivqnhvekdhsgalpeihkkfpeapiyctevaveglvkhfp
slkgapfkvvkslesidlggktltfleapllhwpdsmftlyaeegilfsndafgqhlcft
qrfdheipenilmdanqkfyanlitplsklvlkkfkevielgllekikmiapshgqiwtd
pmkvigayqdfatgkckdkvtivydtmhgstqkmahafaegimsegvdvkmyflhnders
eivkdildskafllgaptiydepfpsvgdliyylkglkfnrtglkrlalafgsmggnggg
tkvlaeklkecgfevldeyelyyvptedelekcynmgkrlavkvkemk

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >6zlfG (G:)
mkadavkiadgvywvgvldwdirmyhgytlngttynaylvfgddkvalidntypgtsaqm
wgrikdacekegrefkidvivqnhvekdhsgalpeihkkfpeapiyctevaveglvkhfp
slkgapfkvvkslesidlggktltfleapllhwpdsmftlyaeegilfsndafgqhlcft
qrfdheipenilmdanqkfyanlitplsklvlkkfkevielgllekikmiapshgqiwtd
pmkvigayqdfatgkckdkvtivydtmhgstqkmahafaegimsegvdvkmyflhnders
eivkdildskafllgaptiydepfpsvgdliyylkglkfnrtglkrlalafgsmggnggg
tkvlaeklkecgfevldeyelyyvptedelekcynmgkrlavkvkemkte

    Sequence, based on observed residues (ATOM records): (download) 
    >6zlfG (G:)
mkadavkiadgvywvgvldwdirmyhgytlngttynaylvfgddkvalidntypgtsaqm
wgrikdacekegrefkidvivqnhvekdhsgalpeihkkfpeapiyctevaveglvkhfp
slkgapfkvvkslesidlggktltfleapllhwpdsmftlyaeegilfsndafgqhlcft
qrfdheipenilmdanqkfyanlitplsklvlkkfkevielgllekikmiapshgqiwtd
pmkvigayqdfatgkckdkvtivydtmhgstqkmahafaegimsegvdvkmyflhnders
eivkdildskafllgaptiydepfpsvgdliyylkglkfnrtglkrlalafgsmggnggg
tkvlaeklkecgfevldeyelyyvptedelekcynmgkrlavkvkemk

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >6zlfH (H:)
mkadavkiadgvywvgvldwdirmyhgytlngttynaylvfgddkvalidntypgtsaqm
wgrikdacekegrefkidvivqnhvekdhsgalpeihkkfpeapiyctevaveglvkhfp
slkgapfkvvkslesidlggktltfleapllhwpdsmftlyaeegilfsndafgqhlcft
qrfdheipenilmdanqkfyanlitplsklvlkkfkevielgllekikmiapshgqiwtd
pmkvigayqdfatgkckdkvtivydtmhgstqkmahafaegimsegvdvkmyflhnders
eivkdildskafllgaptiydepfpsvgdliyylkglkfnrtglkrlalafgsmggnggg
tkvlaeklkecgfevldeyelyyvptedelekcynmgkrlavkvkemkte

    Sequence, based on observed residues (ATOM records): (download) 
    >6zlfH (H:)
mkadavkiadgvywvgvldwdirmyhgytlngttynaylvfgddkvalidntypgtsaqm
wgrikdacekegrefkidvivqnhvekdhsgalpeihkkfpeapiyctevaveglvkhfp
slkgapfkvvkslesidlggktltfleapllhwpdsmftlyaeegilfsndafgqhlcft
qrfdheipenilmdanqkfyanlitplsklvlkkfkevielgllekikmiapshgqiwtd
pmkvigayqdfatgkckdkvtivydtmhgstqkmahafaegimsegvdvkmyflhnders
eivkdildskafllgaptiydepfpsvgdliyylkglkfnrtglkrlalafgsmggnggg
tkvlaeklkecgfevldeyelyyvptedelekcynmgkrlavkvkemk

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >6zlfI (I:)
mkadavkiadgvywvgvldwdirmyhgytlngttynaylvfgddkvalidntypgtsaqm
wgrikdacekegrefkidvivqnhvekdhsgalpeihkkfpeapiyctevaveglvkhfp
slkgapfkvvkslesidlggktltfleapllhwpdsmftlyaeegilfsndafgqhlcft
qrfdheipenilmdanqkfyanlitplsklvlkkfkevielgllekikmiapshgqiwtd
pmkvigayqdfatgkckdkvtivydtmhgstqkmahafaegimsegvdvkmyflhnders
eivkdildskafllgaptiydepfpsvgdliyylkglkfnrtglkrlalafgsmggnggg
tkvlaeklkecgfevldeyelyyvptedelekcynmgkrlavkvkemkte

    Sequence, based on observed residues (ATOM records): (download) 
    >6zlfI (I:)
mkadavkiadgvywvgvldwdirmyhgytlngttynaylvfgddkvalidntypgtsaqm
wgrikdacekegrefkidvivqnhvekdhsgalpeihkkfpeapiyctevaveglvkhfp
slkgapfkvvkslesidlggktltfleapllhwpdsmftlyaeegilfsndafgqhlcft
qrfdheipenilmdanqkfyanlitplsklvlkkfkevielgllekikmiapshgqiwtd
pmkvigayqdfatgkckdkvtivydtmhgstqkmahafaegimsegvdvkmyflhnders
eivkdildskafllgaptiydepfpsvgdliyylkglkfnrtglkrlalafgsmggnggg
tkvlaeklkecgfevldeyelyyvptedelekcynmgkrlavkvkemk

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >6zlfJ (J:)
mkadavkiadgvywvgvldwdirmyhgytlngttynaylvfgddkvalidntypgtsaqm
wgrikdacekegrefkidvivqnhvekdhsgalpeihkkfpeapiyctevaveglvkhfp
slkgapfkvvkslesidlggktltfleapllhwpdsmftlyaeegilfsndafgqhlcft
qrfdheipenilmdanqkfyanlitplsklvlkkfkevielgllekikmiapshgqiwtd
pmkvigayqdfatgkckdkvtivydtmhgstqkmahafaegimsegvdvkmyflhnders
eivkdildskafllgaptiydepfpsvgdliyylkglkfnrtglkrlalafgsmggnggg
tkvlaeklkecgfevldeyelyyvptedelekcynmgkrlavkvkemkte

    Sequence, based on observed residues (ATOM records): (download) 
    >6zlfJ (J:)
mkadavkiadgvywvgvldwdirmyhgytlngttynaylvfgddkvalidntypgtsaqm
wgrikdacekegrefkidvivqnhvekdhsgalpeihkkfpeapiyctevaveglvkhfp
slkgapfkvvkslesidlggktltfleapllhwpdsmftlyaeegilfsndafgqhlcft
qrfdheipenilmdanqkfyanlitplsklvlkkfkevielgllekikmiapshgqiwtd
pmkvigayqdfatgkckdkvtivydtmhgstqkmahafaegimsegvdvkmyflhnders
eivkdildskafllgaptiydepfpsvgdliyylkglkfnrtglkrlalafgsmggnggg
tkvlaeklkecgfevldeyelyyvptedelekcynmgkrlavkvkemk

  • Chain 'K':
    Sequence, based on SEQRES records: (download) 
    >6zlfK (K:)
mkadavkiadgvywvgvldwdirmyhgytlngttynaylvfgddkvalidntypgtsaqm
wgrikdacekegrefkidvivqnhvekdhsgalpeihkkfpeapiyctevaveglvkhfp
slkgapfkvvkslesidlggktltfleapllhwpdsmftlyaeegilfsndafgqhlcft
qrfdheipenilmdanqkfyanlitplsklvlkkfkevielgllekikmiapshgqiwtd
pmkvigayqdfatgkckdkvtivydtmhgstqkmahafaegimsegvdvkmyflhnders
eivkdildskafllgaptiydepfpsvgdliyylkglkfnrtglkrlalafgsmggnggg
tkvlaeklkecgfevldeyelyyvptedelekcynmgkrlavkvkemkte

    Sequence, based on observed residues (ATOM records): (download) 
    >6zlfK (K:)
mkadavkiadgvywvgvldwdirmyhgytlngttynaylvfgddkvalidntypgtsaqm
wgrikdacekegrefkidvivqnhvekdhsgalpeihkkfpeapiyctevaveglvkhfp
slkgapfkvvkslesidlggktltfleapllhwpdsmftlyaeegilfsndafgqhlcft
qrfdheipenilmdanqkfyanlitplsklvlkkfkevielgllekikmiapshgqiwtd
pmkvigayqdfatgkckdkvtivydtmhgstqkmahafaegimsegvdvkmyflhnders
eivkdildskafllgaptiydepfpsvgdliyylkglkfnrtglkrlalafgsmggnggg
tkvlaeklkecgfevldeyelyyvptedelekcynmgkrlavkvkemk

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6zlfL (L:)
mkadavkiadgvywvgvldwdirmyhgytlngttynaylvfgddkvalidntypgtsaqm
wgrikdacekegrefkidvivqnhvekdhsgalpeihkkfpeapiyctevaveglvkhfp
slkgapfkvvkslesidlggktltfleapllhwpdsmftlyaeegilfsndafgqhlcft
qrfdheipenilmdanqkfyanlitplsklvlkkfkevielgllekikmiapshgqiwtd
pmkvigayqdfatgkckdkvtivydtmhgstqkmahafaegimsegvdvkmyflhnders
eivkdildskafllgaptiydepfpsvgdliyylkglkfnrtglkrlalafgsmggnggg
tkvlaeklkecgfevldeyelyyvptedelekcynmgkrlavkvkemkte