PDB entry 4wsv

View 4wsv on RCSB PDB site
Description: The crystal structure of hemagglutinin from A/Taiwan/1/2013 in complex with 6'SLN
Class: viral protein
Keywords: Hemagglutinin, influenza virus, H6, VIRAL PROTEIN
Deposited on 2014-10-28, released 2015-02-25
The last revision prior to the SCOPe 2.05 freeze date was dated 2015-02-25, with a file datestamp of 2015-02-20.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: 0.248
AEROSPACI score: 0.12 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hemagglutinin HA1 chain
    Species: Influenza A virus H6N1 subtype [TaxId:119212]
    Database cross-references and differences (RAF-indexed):
    • PDB 4WSV
    Domains in SCOPe 2.05: d4wsva_
  • Chain 'B':
    Compound: Hemagglutinin HA2 chain
    Species: Influenza A virus H6N1 subtype [TaxId:119212]
    Database cross-references and differences (RAF-indexed):
    • PDB 4WSV (0-End)
    Domains in SCOPe 2.05: d4wsvb_
  • Chain 'C':
    Compound: Hemagglutinin HA1 chain
    Species: Influenza A virus H6N1 subtype [TaxId:119212]
    Database cross-references and differences (RAF-indexed):
    • PDB 4WSV
    Domains in SCOPe 2.05: d4wsvc_
  • Chain 'D':
    Compound: Hemagglutinin HA2 chain
    Species: Influenza A virus H6N1 subtype [TaxId:119212]
    Database cross-references and differences (RAF-indexed):
    • PDB 4WSV (0-End)
    Domains in SCOPe 2.05: d4wsvd_
  • Chain 'E':
    Compound: Hemagglutinin HA1 chain
    Species: Influenza A virus H6N1 subtype [TaxId:119212]
    Database cross-references and differences (RAF-indexed):
    • PDB 4WSV
    Domains in SCOPe 2.05: d4wsve_
  • Chain 'F':
    Compound: Hemagglutinin HA2 chain
    Species: Influenza A virus H6N1 subtype [TaxId:119212]
    Database cross-references and differences (RAF-indexed):
    • PDB 4WSV (0-End)
    Domains in SCOPe 2.05: d4wsvf_
  • Heterogens: NAG, SIA

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4wsvA (A:)
adlgsdkicigyhannsttqvdtlleknvtvthsvellenqkekrfckimnkapldlkdc
tiegwilgnpkcdlllgdqswsyiverpnaqngicypgvlneleelkafigsgerverfe
mfpkstwagvdtsrgvtnacpsytidssfyrnlvwivktdsatypvikgtynntgtqpil
yfwgvhhpldttvqdnlygsgdkyvrmgtesmnfakspeiaarpavngqrsridyywsvl
rpgetlnvesngnliapwyaykfvstnkkgavfksdlpiencdatcqtitgvlrtnktfq
nvsplwigecpkyvkseslrlatglrnvpqiatr

    Sequence, based on observed residues (ATOM records): (download) 
    >4wsvA (A:)
sdkicigyhannsttqvdtlleknvtvthsvellenqkekrfckimnkapldlkdctieg
wilgnpkcdlllgdqswsyiverpnaqngicypgvlneleelkafigsgerverfemfpk
stwagvdtsrgvtnacpsytidssfyrnlvwivktdsatypvikgtynntgtqpilyfwg
vhhpldttvqdnlygsgdkyvrmgtesmnfakspeiaarpavngqrsridyywsvlrpge
tlnvesngnliapwyaykfvstnkkgavfksdlpiencdatcqtitgvlrtnktfqnvsp
lwigecpkyvkseslrlatglrnvp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4wsvB (B:)
gifgaiagfieggwtgmidgwygyhhensqgsgyaadrestqkaidgitnkvnsiinkmn
tqfeavdhefsnlerrignlnkrmedgfldvwtynaellvllenertldlhdanvknlye
kvksqlrdnandlgngcfefwhkcdnecmesvkngtydypkyqkesklnrqgiesgrlvp
r

    Sequence, based on observed residues (ATOM records): (download) 
    >4wsvB (B:)
gifgaiagfieggwtgmidgwygyhhensqgsgyaadrestqkaidgitnkvnsiinkmn
tqfeavdhefsnlerrignlnkrmedgfldvwtynaellvllenertldlhdanvknlye
kvksqlrdnandlgngcfefwhkcdnecmesvkngtydypkyqkeskl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4wsvC (C:)
adlgsdkicigyhannsttqvdtlleknvtvthsvellenqkekrfckimnkapldlkdc
tiegwilgnpkcdlllgdqswsyiverpnaqngicypgvlneleelkafigsgerverfe
mfpkstwagvdtsrgvtnacpsytidssfyrnlvwivktdsatypvikgtynntgtqpil
yfwgvhhpldttvqdnlygsgdkyvrmgtesmnfakspeiaarpavngqrsridyywsvl
rpgetlnvesngnliapwyaykfvstnkkgavfksdlpiencdatcqtitgvlrtnktfq
nvsplwigecpkyvkseslrlatglrnvpqiatr

    Sequence, based on observed residues (ATOM records): (download) 
    >4wsvC (C:)
sdkicigyhannsttqvdtlleknvtvthsvellenqkekrfckimnkapldlkdctieg
wilgnpkcdlllgdqswsyiverpnaqngicypgvlneleelkafigsgerverfemfpk
stwagvdtsrgvtnacpsytidssfyrnlvwivktdsatypvikgtynntgtqpilyfwg
vhhpldttvqdnlygsgdkyvrmgtesmnfakspeiaarpavngqrsridyywsvlrpge
tlnvesngnliapwyaykfvstnkkgavfksdlpiencdatcqtitgvlrtnktfqnvsp
lwigecpkyvkseslrlatglrnvp

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4wsvD (D:)
gifgaiagfieggwtgmidgwygyhhensqgsgyaadrestqkaidgitnkvnsiinkmn
tqfeavdhefsnlerrignlnkrmedgfldvwtynaellvllenertldlhdanvknlye
kvksqlrdnandlgngcfefwhkcdnecmesvkngtydypkyqkesklnrqgiesgrlvp
r

    Sequence, based on observed residues (ATOM records): (download) 
    >4wsvD (D:)
gifgaiagfieggwtgmidgwygyhhensqgsgyaadrestqkaidgitnkvnsiinkmn
tqfeavdhefsnlerrignlnkrmedgfldvwtynaellvllenertldlhdanvknlye
kvksqlrdnandlgngcfefwhkcdnecmesvkngtydypkyqkeskl

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4wsvE (E:)
adlgsdkicigyhannsttqvdtlleknvtvthsvellenqkekrfckimnkapldlkdc
tiegwilgnpkcdlllgdqswsyiverpnaqngicypgvlneleelkafigsgerverfe
mfpkstwagvdtsrgvtnacpsytidssfyrnlvwivktdsatypvikgtynntgtqpil
yfwgvhhpldttvqdnlygsgdkyvrmgtesmnfakspeiaarpavngqrsridyywsvl
rpgetlnvesngnliapwyaykfvstnkkgavfksdlpiencdatcqtitgvlrtnktfq
nvsplwigecpkyvkseslrlatglrnvpqiatr

    Sequence, based on observed residues (ATOM records): (download) 
    >4wsvE (E:)
sdkicigyhannsttqvdtlleknvtvthsvellenqkekrfckimnkapldlkdctieg
wilgnpkcdlllgdqswsyiverpnaqngicypgvlneleelkafigsgerverfemfpk
stwagvdtsrgvtnacpsytidssfyrnlvwivktdsatypvikgtynntgtqpilyfwg
vhhpldttvqdnlygsgdkyvrmgtesmnfakspeiaarpavngqrsridyywsvlrpge
tlnvesngnliapwyaykfvstnkkgavfksdlpiencdatcqtitgvlrtnktfqnvsp
lwigecpkyvkseslrlatglrnvp

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >4wsvF (F:)
gifgaiagfieggwtgmidgwygyhhensqgsgyaadrestqkaidgitnkvnsiinkmn
tqfeavdhefsnlerrignlnkrmedgfldvwtynaellvllenertldlhdanvknlye
kvksqlrdnandlgngcfefwhkcdnecmesvkngtydypkyqkesklnrqgiesgrlvp
r

    Sequence, based on observed residues (ATOM records): (download) 
    >4wsvF (F:)
gifgaiagfieggwtgmidgwygyhhensqgsgyaadrestqkaidgitnkvnsiinkmn
tqfeavdhefsnlerrignlnkrmedgfldvwtynaellvllenertldlhdanvknlye
kvksqlrdnandlgngcfefwhkcdnecmesvkngtydypkyqkeskl